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. 2022 Oct 2;25(10):105242. doi: 10.1016/j.isci.2022.105242
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

PY79 (B. subtilis wild type) (Youngman et al., 1984) NA
BKK30700 (rpmEB::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK22880 (ypfD::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK28470 (lysC::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK40350 (rocR::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK05850 (gmuR::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK29010 (speD::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK05950 (ydiF::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK35940 (rbsA::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK25100 (zur::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK15770 (prkC::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK13400 (ykoU::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK19430 (cdaS::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK00650 (yabS::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK13350 (ykoN::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK00630 (yabR::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK33620 (yvaK::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK02330 (ybfQ::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK29830 (ytpQ::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK13250 (ykoG::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK10000 (yhaH::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK05770 (ydhI::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK31390 (yugI::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK24250 (ahrC::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
BKK37790 (rocG::kan) B. subtilis Strain Collection (Koo et al., 2017) NA
LR14 (mls-turboID-ywlEHAx2) This study NA
LR30 (ahrC::kan) This study NA
LR31 (rocR::mls) This study NA
LR32 (rocR::mls, ahrC::kan) This study NA
LR33 (gudB::tet) This study NA
LR38 (gudB::tet, rocR::mls, ahrC::kan) This study NA
LR127 (gudB::tet, rocR::mls, ahrC::kan amyE::PIPTG-rocG-spc) This study NA
LR133 (gudB::tet, rocR::mls, ahrC::kan amyE::PspoIID-rocG-cat) This study NA
LR134 (gudB::tet, rocR::mls, ahrC::kan amyE::PsspE-rocG-cat) This study NA
LR137 (gudB::tet, rocG::kan) This study NA
LR197 (rocABC::spc) This study NA
LR198 (rocDEF::cat) This study NA
LR200 (gudB::tet, rocABC::spc) This study NA
LR201 (gudB::tet, rocDEF::cat) This study NA
LR203 (gudB::tet rocABC::spc, rocDEF::cat) This study NA
LR205 (rocR::mls, ahrC::kan amyE::rocR-ahrC-cat) This study NA
LR207 (gudB::tet, rocR::mls, ahrC::kan amyE::rocR-ahrC-cat) This study NA
BDP87 (amyE::PspoIIQ-lucH245F-cat) A gift from Prof. Lee Kroos (Parrell and Kroos, 2020). NA
LR209 (gudB::tet amyE::PspoIIQ-lucH245F-cat) This study NA
LR211 (gudB::tet, rocR::mls, ahrC::kan amyE::PspoIIQ-lucH245F-cat) This study NA
LR225 (sacA::PIPTG-rocG-spc) This study NA
LR227 (gudB::tet, rocR::mls, ahrC::kan amyE::PspoIIQ-lucH245F-cat sacA::PIPTG-rocG-spc) This study NA

Chemicals, peptides, and recombinant proteins

Chloramphenicol Sigma-Aldrich Cat#: C0378
Tetracycline Sigma-Aldrich Cat#: 87128
Kanamycin US Biological Cat#: K0010
Lincomycin Sigma-Aldrich Cat#: 62143-5G
Erythromycin Sigma-Aldrich Cat#: E0774
Spectinomycin Sigma-Aldrich Cat#: S4014-5G
Ampicillin Sigma-Aldrich Cat#: A9518-25G
L-Alainine MP BIOMEDICALS Cat#: 100287
Difco™ Nutrient Broth BD Biosciences Cat#: 234000
L-aspargine Sigma-Aldrich Cat#:A8381-100G
D-glucose Sigma-Aldrich Cat#:1632-1KG
D-fructose Sigma-Aldrich Cat#:F3510-500G
Histodenz Sigma-Aldrich Cat#:D2158-100G
RQ1 DNase Promega Cat#:M610A
Terbium(III) chloride hexahydrate Sigma-Aldrich Cat#:212903

Critical commercial assays

Q5 High-Fidelity DNA Polymerase NEW ENGLAND BioLabs Cat#: M0491S
Gibson Assembly Master Mix NEW ENGLAND BioLabs Cat#: E2611L
Quick Ligation Kit NEW ENGLAND BioLabs Cat#: M2200S
ENLITEN® ATP Assay System Promega Cat#:FF2000
Halt™ Protease Inhibitor Cocktail (100X) Thermo Cat#: 78438
iScript™ cDNA Synthesis Kit BIO-RAD Cat#:170-8891
iTaq Universal SYBR Green Supermix BIO-RAD Cat#: 1725124
FastRNA PRO™ BLUE KIT MP BIOMEDICALS Cat#: 116025050

Recombinant DNA

pDR111 (amyE::PIPTG-spc) a gift from David Rudner (Harvard Medical School) NA
pDG364 (amyE::cat) (Guerout-Fleury et al., 1996) NA
pET2 (amyE::gfp-cat) laboratory stock NA
pLR4 (amyE::PIPTG-rocG-spc) This study NA
pLR5 (amyE::PspoIID-rocG-cat) This study NA
pLR6 (amyE::PsspE-rocG-cat) This study NA
pLR7 (amyE::ProcR-rocR-PahrC-ahrC-cat) This study NA

Sequence-based reagents

Primers used in this study are listed in Table S1. All primers were designed during this study, and synthesized by Integrated DNA Technologies (IDT). NA