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. 2022 Feb 4;2:818619. doi: 10.3389/fbinf.2022.818619

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Copyright © 2022 Davis and Jorgensen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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The main sequence editing window of ApE. (A) The top section of the window shows basic properties of the sequence and selected region. (B) The top section also shows the translation of the selected region. (C) The next pane shows a table of sequence features. Clicking on the arrowhead expands the description of the feature. (D) The next pane shows a list of all features under the mouse pointer (here, hovering over F). (E) The central region of the window contains the text of the sequence, with features highlighted in color. To the right is a vertical representation of these features in the currently displayed region and the scrollbar. On the far right is a representation of all of the features in the sequence. (F) When activated, the X-ray window shows a floating window containing a graphical representation of the line of text under the mouse pointer. (G) The bottom of the window shows an editable sequence comment.