TABLE 3.
The identification of the human protein alignment as potential B cell epitope.
| Human protein (UniProtKB ID) | Alignment location (aa) | Predicted epitope (start-end) | Prediction algorithm | Structured protein region (Y/N) |
|---|---|---|---|---|
| Bone morphogenetic protein 1 (BMP1, P13497) | 34-40 | Y (31-48) | Bepipred Linear Epitope Prediction V1.0 | N |
| C-C motif chemokine 22 (CCL22, O00626) | 23-30 | Y (25-48) | Bepipred Linear Epitope Prediction V1.0 | Y |
| Collagen alpha 3(VI) chain (COL6A3, P12111) | 2200-2205 | Y (2111-2374) | Bepipred Linear Epitope Prediction V1.0 | N |
| Lysozyme-like 1 (Q6UWQ5-2) | 16-24 | Y (11-34) | Bepipred Linear Epitope Prediction V1.0 | Y |
| Lysozyme-like 2 (Q7Z4W2-2) | 16-24 | Y (11-33) | Bepipred Linear Epitope Prediction V1.0 | Y |
| Mucin-12 (Q9UKN1) | 936-961, 2019-2044, 3576-3601, 4659-4684 | NA | Bepipred Linear Epitope Prediction V2.0 | N |
| Tubby Related protein 3 (O75386) | 159-168 | Y (5-187) | Bepipred Linear Epitope Prediction V2.0 | N |
| Reelin (P78509) | 1719-1724 | N | Bepipred Linear Epitope Prediction V2.0 | Y |
| Putative solute carrier organic anion transporter family member 1B7 (LST-3, G3V0H7) | 394-400 | N | Bepipred Linear Epitope Prediction V2.0 | N |
| Lactase-phlorizin hydrolase (P09848) | 1863-1869 | N | Bepipred Linear Epitope Prediction V2.0 | N |
| Alpha-Internexin (Q16352) | 226-238 | Y (154-241) | Bepipred Linear Epitope Prediction V2.0 | Y |
Y, Protein structure available or alignment is within a predicted epitope in the human protein; N, Protein structure not available or the full alignment could not be found within a predicted epitope; NA, epitope prediction results were not obtained.