TABLE 2.
Summary of the ATAC-seq data.
Sample | Raw reads | Raw bases (G) | Raw Q30 | Clean reads | Clean bases (G) | Clean base rate | Clean Q30 |
IMF_H1 | 64,179,061 | 19.25 | 0.88 | 62,847,347 | 15.08 | 0.78 | 0.92 |
IMF_H2 | 86,623,835 | 25.99 | 0.88 | 85,097,723 | 22.55 | 0.87 | 0.91 |
IMF_L1 | 54,820,002 | 16.45 | 0.84 | 53,834,792 | 12.85 | 0.78 | 0.89 |
IMF_L2 | 63,169,427 | 18.95 | 0.87 | 61,781,734 | 15.15 | 0.80 | 0.91 |
Total | 268,792,325 | 80.64 | 263,561,596 | 65.63 | 3.23 |