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. 2022 Oct 19;17(10):e0260177. doi: 10.1371/journal.pone.0260177

Fig 4. Precision and recall evaluation of phasing softwares Beagle5.4, ShapeIT4, and Eagle2.4.1.

Fig 4

Precision and recall were evaluated using 540 trio children in the 1000GP-30x reference panel. Trios were selected and phased using trioPhaser software to ensure the highest accuracy and then the children were used as ground truth for the comparison. ShapeIT4 (pink dot) got the highest scores over Eagle2.4.1 and Beagle5.4 respectively.