Fig. 2. Genomic diversity for Chagyrskaya Neanderthals compared with other hominids.
Neanderthal (blue), early modern human (orange) and present-day gorilla (green) populations are coloured the same throughout the figure. Present-day human populations are coloured according to the geographical region (see colour key). a, The proportion of the genome that is in homozygous tracts longer than 10 cM (dark) and tracts between 2.5 and 10 cM (light colour) for ancient individuals (early modern humans, Neanderthals and Denisovans). b, Average proportion of the genome that is homozygous for Chagyrskaya Neanderthals, early modern humans (grouped together) and present-day human and gorilla populations37. Data are mean ± 95% confidence intervals for the estimates of the mean. The sample size is equal to that of the mtDNA sequences listed below. c, Mean coalescence time for mtDNA (MT) and Y chromosome (left and right bars of each pair, respectively) for Neanderthal, early modern human and gorilla populations. d, Mean coalescence time for early modern humans (grouped together) and present-day human and gorilla populations. c,d, Data are mean ± 95% confidence intervals and points are all pairwise comparisons. The number of Y chromosome and mtDNA-genomes used in pairwise comparisons for each population is as follows: Neanderthal and Denisovan, Chagyrskaya (MT = 12, Y = 6), Vindija (MT = 4, Y = 0), Goyet (Neanderthal) (MT = 7, Y = 0); early modern humans, Sunghir (MT = 4, Y = 4), Věstonice (MT = 4, Y = 0), Goyet (MT = 5, Y = 0), Bacho Kiro (MT = 4, Y = 3), which combined is (MT = 17, Y = 7); gorillas, mountain gorilla (MT = 8, Y = 3), eastern lowland gorilla (MT = 7, Y = 2); Americas, Suruí (MT = 9, Y = 4), Karitiana (MT = 13, Y = 5), Pima (MT = 14, Y = 7), Colombian (MT = 8, Y = 2), Mayan (MT = 22, Y = 2); central South Asia, Balochi (MT = 25, Y = 24), Makrani (MT = 26, Y = 20), Pathan (MT = 25, Y = 19), Sindhi (MT = 25, Y = 20), Brahui (MT = 26, Y = 25); Europe, French (MT = 29, Y = 11), Basque (MT = 24, Y = 15), Adygei (MT = 17, Y = 7), Sardinian (MT = 29, Y = 15), Russian (MT = 26, Y = 16); East Asia, Lahu (MT = 9, Y = 7), Japanese (MT = 28, Y = 19), Yakut (MT = 26, Y = 18), Han (MT = 34, Y = 15), Naxi (MT = 9, Y = 6); Africa, Biaka (MT = 23, Y = 22), Mbuti (MT = 14, Y = 10), Yoruba (MT = 23, Y = 11), Mandinka (MT = 23, Y = 14), Bantu (Kenya) (MT = 12, Y = 10).