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. 2022 Oct 21;4(4):lqac079. doi: 10.1093/nargab/lqac079

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© The Author(s) 2022. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — Number of elements reported by ICEscreen, CONJscan and ICEfinder compared to the ICEs and IMEs of the FirmiData reference. Elements of FirmiData that were detected by a tool and share exactly the same SP composition (all SPs detected and co-localized without additional SPs) and a similar element type as the reference are represented in green. Wrongly characterized elements sharing strictly the same SPs are represented in blue. Elements of FirmiData that have been detected by a tool but for which SPs are missing and/or wrongly added are also represented in blue. Elements of the reference that were detected by a tool but combined with other elements are represented in orange. Elements of the reference that were not detected by a tool are represented in black. The top A panel and the bottom A panel refer to isolated ICEs and IMEs, respectively. The panels on the right show the number of elements in composite structures (only composed of ICEs: top B panel; composed of ICEs & IMEs or IMEs only: bottom B panel). The number of ICEs and IMEs are represented in solid color and in hashed color, respectively.