Table 5. Genes present only one strain, indicating the differences in phenotypes between strain SP3-1 and NS-1T.
| SP3-1 | Length | Function | NS-1 T | Length | Function | % Identity |
|---|---|---|---|---|---|---|
| Genes coding for the flagellum | ||||||
| – | – | – | QTL99899.1 | 679 | Flagellar biosynthesis protein FlhA | – |
| – | – | – | QTL96989.1 | 327 | Peptidoglycan hydrolase FlgJ | – |
| Genes coding for lactate utilization | ||||||
| AZO93337.1 | 233 | GntR family transcriptional regulator: HTH-type transcriptional regulator genes (lutR) | QTL99594.1 | 231 | PFAM Bacterial regulatory proteins, gntR family | 98.68 |
| AZO93433.1 | 229 | QTL99676.1 | 229 | Transcriptional regulator (GntR) | 96.07 | |
| AZO93498.1 | 244 | – | – | – | – | |
| AZO93635.1 | 244 | – | – | – | – | |
| AZO93658.1 | 239 | – | – | – | – | |
| AZO93770.1 | 228 | QTL96707.1 | 228 | Transcriptional regulator (GntR) | 97.36 | |
| AZO94208.1 | 231 | QTL97135.1 | 231 | SMART regulatory protein GntR HTH | 99.56 | |
| AZO94455.1 | 244 | QTL97393.1 | 220 | Transcriptional regulator, GntR family | 99.09 | |
| AZO94576.1 | 125 | – | – | – | – | |
| AZO94675.1 | 379 | QTL97604.1 | 358 | PFAM regulatory protein GntR HTH | 98.60 | |
| AZO95757.1 | 234 | – | – | – | – | |
| AZO95845.1 | 226 | – | – | – | – | |
| AZO95907.1 | 237 | – | – | – | – | |
| AZO96195.1 | 232 | QTL98974.1 | 232 | SMART regulatory protein GntR HTH | 100 | |
| AZO96359.1 | 243 | – | – | – | – | |
| Genes coding for the Raffinose degradation | ||||||
| AZO94804.1 | 742 | Alpha-galactosidase | – | – | – | – |
| Genes coding for D-Rhamnose degradation | ||||||
| AZO93797.1 | 332 | Rhamnose ABC transporter substrate-binding protein (RhaS) | QTL96735.1 | 332 | Rhamnose ABC transporter substrate-binding protein (RhaS) | 98.44 |
| AZO93795.1 | 335 | ABC tansporter permease (RhaP) | QTL96733.1 | 335 | ABC transporter permease (RhaP) |
98.81 |
| AZO93796.1 | 328 | ABC transporter permease (RhaQ) | QTL96734.1 | 328 | ABC transporter permease (RhaQ) | 98.48 |
| – | – | – | QTL96732.1 | 505 | ATP-binding cassette domain-containing protein rhamnose transport system (RhaT) | – |
| Genes coding for salt stress/tolerance | ||||||
| AZO94203.1 | 259 | Molybdate ABC transporter substrate-binding gene (modA) |
– | – | – | – |
| AZO94204.1 | 268 | – | – | – | – | |
| AZO94733.1 | 155 | Glycine/sarcosine/betaine reductase complex selenoprotein A | – | – | – | – |
| AZO94734.1 | 441 | – | – | – | – | |
| AZO94735.1 | 339 | – | – | – | – | |
| Genes coding for alkaliphilic | ||||||
| AZO93678.1 | 430 | Na+/H+ antiporter genes | QTL96621.1 | 430 | Na+/H+ antiporter genes | 99.30 |
| AZO93681.1 | 435 | QTL96624.1 | 345 | 99.77 | ||
| AZO94987.1 | 401 | QTL97942.1 | 401 | 99.5 | ||
| AZO95163.1 | 427 | QTL98098.1 | 427 | 98.12 | ||
| AZO96039.1 | 238 | – | – | – | ||
| AZO94275.1 | 517 | Na+/H+ antiporter (NhaC) | – | – | – | – |
| AZO96817.1 | 476 | – | – | – | – | |
| – | – | – | QTL98140.1 | 463 | Na+/H+ antiporter (NhaC) | – |
Notes.
“– ” gene absent in the other strains.