TABLE 2.
Sequence identities between SDAV and other coronaviruses of the same serogroupa
Protein | % Sequence identity
|
|||
---|---|---|---|---|
BCV | MHV JHM | MHV A59 | HCV OC43 | |
NS2 nonstructural | 47.8 | 91.3 | 90.8 | NAb |
HE protein | 57.9 | 91.1 | NA | 58.6 |
S protein | 64.5 | 76.2 | 79.2 | 64.4 |
sM protein | 64.4 | 85.2 | 85.2 | 66.7 |
M protein | 84.5 | 93.9 | 95.6 | 82.3 |
N protein | 70.8 | 93.6 | 93.4 | NA |
3′ noncoding (nucleotides) | 73.3 | 98.3 | 98.7 | NA |
Overallc | 66.8 | NA | 86.1 | NA |