TABLE 2.
Primers used in this study
Namea | Sequenceb | Tempc (°C) | Used |
---|---|---|---|
MMMLP481 | cgccatatgCCATTAGTTGTTGTTTCATGTAAA | 54 | SDM, C |
MMMLP482(r) | TCTTGTTTTTGCCACTCATTTTTTG | 54 | SDM |
MMMLP483(f) | CAAAAAATGAGTGGCAAAAACAAGA | 54 | SDM |
MMMLP484 | ccggatccCCAATTTGATAAAACTTGATTAAAGT | 54 | SDM, C |
P48B1f | aacgaattcAGTTTTATCAAATTGGAATACAGAAAAT | 55 | SDM, C |
P48B1r | CATTTGCTGTTTTCCAGCTCGATAAATC | 55 | SDM |
P48B2f | GTGATTTATCGAGCTGGAAAACAGCAAATG | 55 | SDM |
P48B2r | CATTACTTACATTCCAACTCGAAATATCTT | 55 | SDM |
P48B3f | AAGATATTTCGAGTTGGAATGTAAGTAATG | 55 | SDM |
P48B3r | ATATTTTTTAGATTCCAATCTGAAAGTGAT | 55 | SDM |
P48B4f | ATCACTTTCAGATTGGAATCTAAAAAATAT | 55 | SDM |
P48B4r | CTTTTGATACATCCCAATCTAAAGACTTAT | 55 | SDM |
P48B5f | ATAAGTCTTTAGATTGGGATGTATCAAAAG | 55 | SDM |
P48B5r | TTTGAAACATTCCAATTAGTTATATTTTG | 55 | SDM |
P48B6f | TCAAAATATAACTAATTGGAATGTTTCAAAT | 55 | SDM |
P48B6r | ACATTATCAACTCTCCAATTTTTTATATCT | 55 | SDM |
P48B7f | AGATATAAAAAATTGGAGAGTTGATAATGTA | 55 | SDM |
P48B7r | ccggatccTACATTTTTTACATTCCAACTTGAAATATC | 55 | SDM, C |
P48FBF | GTTTTATCAAATTGGAATACAGAAAATGTA | 55 | SDM |
P48FAL | TACATTTTCTGTATTCCAATTTGATAAAAC | 55 | SDM |
P48 EcoRI | gcagaattcCCATTAGTTGTTGTTTCATGTAAA | 55 | SDM, C |
MMMSCO5-6 | CAACCAAAGGCATCATATGA | 47.5 | P |
MMMSCO5-7 | CTCTGAGAGGGAATAATG | 47.5 | P |
f and r, forward and reverse mutagenesis primers.
Lowercase letters indicate the nucleotides that were added to the flanking primers in order to create restriction enzyme recognition sites (italics) for cloning. Substituted nucleotides for mutagenesis are underlined.
Annealing temperature for PCR amplification.
SDM, site-directed mutagenesis; C, cloning; P, Identification of lppQ by PCR.