TABLE 2.
The descriptive statistics for 18 pork color traits: number of animals per trait (N), means, SD, minimum (Min.), and maximum (Max.) values for different datasets (CB, PB, and Combined dataset).
| CB | PB | Combined dataset | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Trait | N | Mean | SD | Min | Max | N | Mean | SD | Min | Max | N | Mean | SD | Min | Max |
| FCOLA | 941 a | 3.71 | 1.13 | 0.70 | 7.90 | 873 | 2.84 | 1.34 | -0.40 | 7.30 | 1844 | 3.38 | 1.52 | −0.40 | 19.20 |
| FCOLB | 953 | 18.31 | 1.48 | 11.70 | 24.40 | 885 | 10.84 | 1.75 | 6.00 | 17.20 | 1844 | 14.70 | 4.08 | 3.80 | 24.40 |
| FCOLL | 953 | 75.29 | 1.63 | 66.60 | 79.80 | 891 | 78.96 | 2.40 | 64.00 | 84.60 | 1844 | 77.06 | 2.74 | 64.00 | 84.60 |
| QFCOLA | 953 | 4.82 | 1.60 | 0.70 | 11.30 | 881 | 2.39 | 1.37 | -1.00 | 6.70 | 1844 | 3.68 | 1.96 | -1.00 | 13.40 |
| QFCOLB | 953 | 13.61 | 1.57 | 9.60 | 18.70 | 885 | 8.27 | 1.35 | 4.70 | 12.10 | 1844 | 11.04 | 3.04 | 4.70 | 18.70 |
| QFCOLL | 953 | 49.42 | 3.46 | 39.10 | 62.10 | 881 | 53.23 | 3.37 | 42.10 | 65.50 | 1844 | 51.27 | 4.04 | 36.50 | 68.90 |
| FMCOLA | 953 | 6.07 | 1.47 | 2.00 | 11.48 | 891 | 4.58 | 1.12 | 1.08 | 8.75 | 1844 | 5.35 | 1.51 | 1.08 | 11.48 |
| FMCOLB | 953 | 14.91 | 1.69 | 10.38 | 21.90 | 891 | 9.38 | 1.24 | 5.95 | 13.90 | 1844 | 12.24 | 3.14 | 5.95 | 21.90 |
| FMCOLL | 953 | 48.46 | 2.64 | 39.88 | 60.50 | 891 | 48.15 | 2.53 | 41.43 | 55.73 | 1844 | 48.31 | 2.59 | 39.88 | 60.50 |
| TMCOLA | 950 | 7.65 | 1.19 | 3.39 | 11.39 | - | - | - | - | - | - | - | - | - | - |
| TMCOLB | 950 | 2.70 | 1.29 | -1.54 | 7.48 | - | - | - | - | - | - | - | - | - | - |
| TMCOLL | 950 | 44.26 | 3.11 | 31.99 | 55.88 | - | - | - | - | - | - | - | - | - | - |
| GMCOLA | 953 | 6.74 | 1.20 | 2.40 | 10.70 | 891 | 5.46 | 1.27 | 1.20 | 9.60 | 1844 | 6.12 | 1.39 | 1.20 | 10.70 |
| GMCOLB | 953 | 13.63 | 1.11 | 9.60 | 17.30 | 891 | 8.91 | 1.13 | 5.40 | 12.70 | 1844 | 11.35 | 2.61 | 5.40 | 17.30 |
| GMCOLL | 953 | 45.31 | 2.45 | 38.00 | 54.20 | 891 | 47.50 | 2.65 | 39.30 | 57.20 | 1844 | 46.37 | 2.77 | 38.00 | 57.20 |
| ICOLA | 953 | 19.30 | 1.73 | 12.00 | 24.10 | 891 | 15.97 | 2.17 | 8.80 | 23.00 | 1844 | 17.69 | 2.59 | 1.60 | 24.10 |
| ICOLB | 953 | 13.61 | 1.57 | 9.60 | 18.70 | 891 | 11.33 | 1.50 | 5.50 | 15.80 | 1844 | 12.51 | 1.91 | 5.50 | 18.70 |
| ICOLL | 953 | 42.54 | 2.86 | 35.10 | 51.80 | 891 | 44.04 | 3.08 | 34.70 | 55.60 | 1844 | 43.26 | 3.06 | 34.70 | 55.60 |
a
The total number of PBs, with both phenotypes and genotypes were 891. However, for these traits, there were extreme phenotypic records which were removed in the analyses to check if the GWAS, results would improve. Due to little changes in GWAS, results for PBs, those removed individuals were added to the analyses of combined CBs, and PBs. CB, crossbred; PB, purebred; N, number of animals; SD, standard deviation; Min, minimum; Max, maximum.