REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse monoclonal anti-hnRNPK | Santa Cruz Biotechnology | Cat#: sc-28380 RRID:AB_627734 |
Mouse anti-IgG2B | Santa Cruz Biotechnology | Cat#: sc-3879 RRID:AB_737262 |
Mouse monoclonal anti-hnRNPU | Millipore | Cat#: 05-1516 RRID:AB_10563506 |
Mouse monoclonal anti-GAPDH | Millipore | Cat# MAB374 RRID:AB_2107445 |
Rabbit polyclonal anti-H2B | Millipore | Cat#07371 RRID:AB_310561 |
Rabbit polyclonal anti-HSP90 | Cell Signaling Technology | Cat#: 4874 RRID: AB_2121214 |
Mouse monoclonal anti-Y14 | Abcam | Cat# ab5828 RRID:AB_2269494 |
Rabbit polyclonal anti-U2AF65 | Abcam | Cat# ab37530 RRID:AB_883336 |
Mouse monoclonal anti-PI(4,5)P2 | Echelon biosciences | Cat#Z-P045 RRID:AB_427225 |
Rabbit polyclonal anti-SF1 | Antibody Verify | N/A |
Rabbit polyclonal anti-RBM14 | Antibody Verify | N/A |
Guinea Pig polyclonal anti-Insulin | DAKO | Cat#: A0564 N/A |
Mouse monoclonal anti-SRSF2 | Sigma | Cat# S4045 RRID:AB_477511 |
Rabbit polyclonal anti-TM7SF3 N-terminus | Sigma | Cat# HPA057640 N/A |
Rabbit polyclonal anti-TM7SF3 C-Terminus | Sigma, This paper | N/A |
Mouse monoclonal anti-α1-subunit of Na+/K+-ATPase (6H) | Dr. M. J. Caplan, Yale |
N/A |
Oligonucleotides | ||
Primers for qPCR and PCR, see Tables S2 and S3 | This paper | N/A |
siRNA-human TM7SF3 | Horizon Discovery | Cat# M-005745-00-0010 |
Human siCON | Horizon Discovery | Cat# D-OO1206-13-20 |
siRNA-Human hnRNPK | Horizon Discovery | Cat# M-011692-00-0005 |
Chemicals, peptides, and recombinant proteins | ||
Protein A-agarose beads | Santa Cruz | Cat# sc-2001 |
Blocking peptide - IKELFQKEQPAGERTPL | Sigma | Customized N/A |
Actinomycin D | Sigma | Cat# A1410 |
High-capacity cDNA reverse transcription kit | ThermoFisher Scientific | Cat# 4368813 |
Lipofectamine 2000 reagent | ThermoFisher Scientific | Cat# 13778-075 |
SYBR Green Master Mix | ThermoFisher Scientific | Cat# A25743 |
Experimental models: Cell line | ||
U2-OS | ATCC | Cat# HTB-96 |
HepG2 | ATCC | Cat# HB-8065 |
HFF | ATCC | Cat# SCRC-1041 |
Software and algorithms | ||
ImageJ | NIH | https://imagej.nih.gov/ij/ |
Prism | Graphpad | https://www.graphpad.com/scientificsoftware/prism/ |
Image Lab | BioRad | https://www.bio-rad.com/en-us/product/chemidoc-xrs-system?ID=NINJHRKG4 |
STRING analysis | Szklarczyk et al., 2015) PMID:25352553 | https://string-db.org/ |
AlphaFold2 |
Jumper et al. (2021) {PMID: 34265844} |
AlphaFold2.ipynb - Colaboratory (google.com) |