Table A.1.
Search strings used in targeted searches combining animal species‐, resistance‐, bacterial species‐, resistance‐gene‐ and transport‐related terms
| Animal species | Resistance terms | Bacteria or genes | Transport | N° hits PubMed | N° hits Web of Science | |||
|---|---|---|---|---|---|---|---|---|
| "Cattle"[Mesh] OR calves[tiab] OR cattle[tiab] OR cow[tiab] OR cows[tiab] OR bovine[tiab] | AND | "Drug Resistance, Microbial"[Mesh] OR "antibiotic resistan*"[tiab] OR "resistan*"[tiab] OR "antimicrobial resistan*"[tiab] OR AMR[tiab] OR "drug resistan*"[tiab] OR multidrug resistan*[tiab] OR MDR[tiab] | AND | "Acinetobacter"[Mesh] OR "Acinetobacter Infections"[Mesh] OR "Campylobacter Infections"[Mesh] OR "Campylobacter"[Mesh] OR "Klebsiella"[Mesh] OR "Klebsiella Infections"[Mesh] OR "Enterobacteriaceae"[Mesh] OR "Enterobacteriaceae Infections"[Mesh] OR "Enterococcus"[Mesh] OR "Escherichia"[Mesh] OR "Escherichia coli Infections"[Mesh] OR "Pseudomonas"[Mesh] OR "Pseudomonas Infections"[Mesh] OR "Salmonella"[Mesh] OR "Salmonella Infections, Animal"[Mesh] OR "Staphylococcus"[Mesh] OR "Staphylococcal Infections"[Mesh] OR "Streptococcus"[Mesh] OR "Streptococcal Infections"[Mesh] OR Acinetobacter[tiab] OR Campylobacter[tiab] OR carbapenemase[tiab] OR Klebsiella[tiab] OR Enterobacteriaceae[tiab] OR Enterococc*[tiab] OR Escherichia[tiab] OR "E coli"[tiab] OR ecoli[tiab] OR Pseudomonas[tiab] OR Salmonell*[tiab] OR Staphylococc*[tiab] OR Streptococc*[tiab] OR arm[tiab] OR cfr[tiab] OR ESBL[tiab] OR mcr[tiab] OR MRSA[tiab] OR optr[tiab] OR vga[tiab] OR VRE[tiab] OR methylase[tiab] | AND | "Transportation"[Mesh] OR automobile*[tiab] OR boat[tiab] OR boats[tiab] OR car[tiab] OR cars[tiab] OR lorry[tiab] OR lorries[tiab] OR ship[tiab] OR ships[tiab] OR train[tiab] OR trains[tiab] OR transport[tiab] OR transportation*[tiab] OR transporting[tiab] OR transports[tiab] OR transported[tiab] OR truck[tiab] OR trucks[tiab] OR vehicle*[tiab] | 121 | 179 |
| "Swine"[Mesh] OR piglet[tiab] OR sow [tiab] OR porcine[tiab] OR pig[tiab] | 142 | 170 | ||||||
| “broiler*”[tiab] OR poultry[tiab] OR chicken[tiab] OR lay*[tiab] OR hen[tiab] OR hens[tiab] OR turkey*[tiab] OR chick*[tiab] OR hatch*[tiab] | 189 | 448 | ||||||
| lairage[tiab] OR slaughterhouse[tiab] | – | – | – | – | – | – | 3,885 | 8,904 |
| "Lairage"[Mesh] OR lairage[tiab] | AND | – | – | 25 | 34 |