Antibodies |
|
Anti-human CXCR5 BUV395 (final dilution 1:80) |
BD Biosciences |
Cat# 740266; RRID: AB_2740008
|
Anti-human CCR4 PE-CF594 (final dilution 1:40) |
BD Biosciences |
Cat# 565391; RRID: AB_2739215
|
Anti-human CCR6 BV480 (final dilution 1:66) |
BD Biosciences |
Cat# 566130; RRID: AB_2739529
|
Anti-human CXCR3 BV510 (final dilution 1:40) |
Biolegend |
Cat# 353726; RRID: AB_2563642
|
Anti-human IgM BUV496 (final dilution 1:200) |
BD Biosciences |
Cat# 750366; RRID: AB_2874541
|
Anti-human CD4 BUV563 (final dilution 1:200) |
BD Biosciences |
Cat# 612912; RRID: AB_2739451
|
Anti-human CD11c BUV661 (final dilution 1:100) |
BD Biosciences |
Cat# 612967, RRID: AB_2870241
|
Anti-human IgD BUV737 (final dilution 1:200) |
BD Biosciences |
Cat# 612798; RRID: AB_2738894
|
Anti-human CD45RA BUV805 (final dilution 1:200) |
BD Biosciences |
Cat# 742020; RRID: AB_2871317
|
Anti-human CD138 BV605 (final dilution 1:50) |
Biolegend |
Cat# 356520; RRID: AB_2562862
|
Anti-human ICOS BV650 (final dilution 1:50) |
Biolegend |
Cat# 313550; RRID: AB_2749929
|
Anti-human CD20 BV750 (final dilution 1:200) |
BD Biosciences |
Cat# 747062; RRID: AB_2871819
|
Anti-human CD38 BV785 (final dilution 1:100) |
Biolegend |
Cat# 303530; RRID: AB_2565893
|
Anti-human CD8α PerCP-eFluor710 (final dilution 1:200) |
Invitrogen |
Cat# 46-0086-42; RRID: AB_2848331
|
Anti-human CD27 PE-Cy5 (final dilution 1:50) |
Invitrogen |
Cat# 15-0279-42; RRID: AB_10717249
|
Anti-human CD19 PE-Cy5.5 (final dilution 1:200) |
Invitrogen |
Cat# 35-0198-42; RRID: AB_11218903
|
Anti-human CD11b Alexa Fluor 700 (final dilution 1:100) |
Biolegend |
Cat# 301356; RRID: AB_2750075
|
Anti-human PD-1 PE-Cy7 (final dilution 1:50) |
Biolegend |
Cat# 329918; RRID: AB_2159324
|
Anti-human/mouse BCL6 Alexa Fluor 647 (final dilution 1:50) |
BD Biosciences |
Cat# 561525; RRID: AB_10898007
|
|
Biological samples |
|
Human FNA |
Perelman Center for Advanced Medicine |
N/A |
Human PBMC |
Perelman Center for Advanced Medicine |
N/A |
Human pediatric tonsils |
Children’s Hospital of Philadelphia |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
Fixable viability dye eFluor 780 |
Invitrogen |
Cat# 65086518 |
Recombinant RBD |
Norbert Pardi |
N/A |
Recombinant Spike-Biotin |
R&D Systems |
Cat# BT10549-050 |
Recombinant PR8 HA |
Norbert Pardi |
N/A |
Streptavidin BV421 |
Biolegend |
Cat# 405225 |
Streptavidin Alexa Fluor 488 |
Biolegend |
Cat# 405235 |
Streptavidin Alexa Fluor 647 |
Biolegend |
Cat# 405237 |
EZ-LinkTM Micro Sulfo-NHS-LC-Biotinylation Kit |
Thermo Fisher Scientific |
Cat# 21935 |
EZ-Link™ Sulfo-NHS-LC-Biotin, No-Weigh™ format (included in EZ-LinkTM Micro Sulfo-NHS-LC-Biotinylation Kit) |
Thermo Fisher Scientific |
Cat# A39257 |
ZebaTM spin desalting columns (included in EZ-LinkTM Micro Sulfo-NHS-LC-Biotinylation Kit) |
Thermo Fisher Scientific |
Cat# 89889 |
BupH phosphate-buffered saline (included in EZ-LinkTM Micro Sulfo-NHS-LC-Biotinylation Kit) |
Thermo Fisher Scientific |
Cat# 28372 |
FoxP3/transcription factor staining buffer set |
ThermoFisher Scientific |
Cat# 00-5523-00 |
ACK lysis buffer |
Gibco |
Cat# A1049201 |
DMSO |
Sigma |
Cat# D2650 |
FBS |
Corning |
Cat# 35-010-CV |
EDTA |
Invitrogen |
Cat# 15575-038 |
PBS |
Corning |
Cat# 21-031-CV |
Glutamax |
Gibco |
Cat# 35050-061 |
Penicillin-streptomycin |
Gibco |
Cat# 15140-122 |
RPMI |
Gibco |
Cat# 22400-089 |
Brilliant Stain Buffer |
BD BioSciences |
Cat# 563794 |
0.9% Buffered lidocaine |
Hospital of the University of Pennsylvania |
N/A |
4% Chlorhexidine gluconate |
SC Johnson |
Cat# 134439 |
16% Paraformaldehyde |
Electron Microscopy Sciences |
Cat# 15710 |
Molecular biology grade water |
Corning |
Cat# 46-000-Cl |
|
Software and algorithms |
|
FlowJo v10 |
FlowJo LLC |
RRID: SCR_008520 |
|
Other |
|
UltraComp eBeadsTM compensation beads |
Thermo Fisher |
Cat# 01-2222-42 |
Spectral cytometer |
Cytek |
Aurora spectral analyzer (5 lasers, 64 detectors) |
Ultrasound machine |
Phillips |
EPIQ ELITE or IU222 |
Ultrasound probes |
Phillips |
L15-7io or C8-5 |