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. 2022 Oct 25;12:17878. doi: 10.1038/s41598-022-22491-8

Figure 3.

Figure 3

Maximum likelihood (ML) trees of the newly characterized HEV-2b sequences isolated during the 2012–2014 HEV outbreak in Senegal using (A) full-length genomes and (B) partial ORF2 sequences of HEV. The ML trees were inferred for 1000 replications using the General Time Reversible model with 4 Gamma categories. The ML trees were rooted on midpoints. Nodes were supported by the bootstrap values and values lower than 70% are hidden for more clarity. Strain’s identifiers are designated with accession number, geno/subtype, country and name. The Senegalese sequences are shown in red while the closest sequence from Nigerian (NG/17-0500) is highlighted in green.