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. 2022 Oct 4;62(20):4852–4862. doi: 10.1021/acs.jcim.2c00715

Table 6. Comparison of the Performance of MFBERT with Other State-of-the-Art Models from the Literaturea.

  MFBERT (+FFNN) MFBERT (best) ChemBERTa SSLP-FPs (best) MoleculeNet (best) MolBERT (fine-tune)
BBBP* 0.762 0.762 0.663 0.741 0.729 0.762
ClinTox* 0.912 0.912 0.842 0.963 ± 0.044 0.907 0.912
HIV* 0.765 0.765 0.643 0.601 0.792 0.783
ESOL 1.153 ± 0.141 0.423 ± 0.501   0.915 ± 0.01 0.58 0.531 ± 0.04
FreeSolv 1.180 ± 0.440 0.624 ± 0.130   0.891 ± 0.075 1.15 0.948 ± 0.33
lipophilicity 0.868 ± 0.021 0.366 ± 0.032   0.717 ± 0.029 0.655 0.561 ± 0.03
a

*AUCROC score; root mean squared error (RMSE) score.