Table 3.

List of hydrogen bonds observed from the molecular docking of ten peptides (AVP1 to AVP10) to the crystal structure of the SARS-CoV-2 main protease in the apo state (PDB ID: 7C2Q).

Peptides	Peptide Residues	Protease Residues	Distance (Å)	Peptides	Peptide Residues	Protease Residues	Distance (Å)
AVP1	Arg4	Gln180	2.485	AVP4	Arg33	Thr19	2.285
	Ser6	Thr178	2.124	(continue)	Arg33	Thr24	2.335
	Ala7	Glu154	1.971		Arg33	Gln61	2.041
	His10	Cys42	2.978		Arg33	Thr19	2.018
	Val12	Gly131	2.124	AVP5	Ile1	Ala181	2.404
AVP2	Ser4	Gln180	1.976		Asn14	Thr24	2.085
	Leu6	Glu154	1.912	AVP6	Pro1	Gln177	1.917
	Arg8	His151	2.036		Ile2	Glu154	2.013
	Arg8	His160	2.047		Val6	Asn111	2.428
	Ile10	Thr24	2.078		Gln7	Thr24	1.902
	Tyr13	His39	2.778		Ala10	Thr24	2.463
AVP3	Ala5	Thr178	2.410		Lys12	Gly21	2.137
	Leu6	Glu154	1.875		Lys12	Asn57	1.939
	Ser12	Asn111	2.330		Tyr16	Asn55	2.536
	Ala15	Thr24	2.045		Tyr16	Val69	1.995
	Thr19	Thr22	2.017	AVP7	Phe12	Gly131	2.526
AVP4	Ser4	Val286	2.047		Phe12	Cys133	1.924
	Thr8	Pro156	2.031		Phe12	His152	2.091
	Trp11	Ser274	2.279	AVP8	Val1	Asp209	1.898
	Gln12	Asp209	2.021		Val1	Thr157	1.975
	Pro13	Arg123	2.196		Cys12	Thr23	3.071
	Thr15	Ala182	2.471	AVP9	Ala1	Arp209	2.000
	Thr15	Gly183	1.938		Ala1	Thr157	1.861
	Asn20	Gln180	2.430		Thr2	Gly271	2.093
	Gln22	Gln180	2.057		Thr2	Arp185	1.972
	Gln22	Gln177	2.493		Val10	Glu154	1.894
	Gln22	Thr178	2.523		Ala13	Thr24	2.390
	Gln22	Asp175	2.064		Ser19	Asn111	2.178
	Val23	Glu154	1.935		Glu21	Thr24	2.242
	Gln25	Ser132	2.372		Arp22	Gln61	2.349
	Gln25	Glu154	2.035		Arg23	Gln17	2.163
	Gln26	Cys42	2.026		Arg23	Asn64	2.379
	Cys28	Glu154	3.828	AVP10	Gln1	Ala179	2.554
	Gln30	Thr24	1.993		Val5	Glu154	1.868
	Gln31	Thr22	2.426		Tyr7	Ser132	2.501
	Gln31	Thr23	2.093		Tyr7	Glu154	2.111