Table 1.
Repetitive sequences in the O. bidens genome.
| Types | Number | Length (bp) | Rate (%) |
|---|---|---|---|
| Class I | 1,139,895 | 232,332,806 | 23.34 |
| DIRS | 105,253 | 29,919,018 | 3.01 |
| LARD | 655,447 | 119,102,747 | 11.99 |
| LINE | 223,903 | 52,367,782 | 5.27 |
| Copia | 7429 | 2,540,946 | 0.26 |
| Gypsy | 61,709 | 19,444,768 | 1.96 |
| PLE | 24,473 | 8,156,447 | 0.82 |
| SINE | 1725 | 316,380 | 0.03 |
| Unknown | 47,754 | 15,326,877 | 1.54 |
| Class II | 785,886 | 137,824,754 | 12.59 |
| Crypton | 11,798 | 1,634,260 | 0.16 |
| Helitron | 35,267 | 9,129,144 | 0.92 |
| Maverick | 4578 | 567,260 | 0.06 |
| TIR | 601,449 | 113,701,347 | 11.45 |
| Unknown | 132,794 | 17,751,657 | 1.79 |
| SSR | 7405 | 5,817,413 | 0.59 |
| Unknown | 145,781 | 33,606,673 | 3.38 |
| Total | 2,078,967 | 357,309,255 | 43.23 |