| COPD | Chronic obstructive pulmonary disease |
| ALI | Air liquid interface |
| PCLS | Precision cut lung slices |
| hPSCs | Human pluripotent stem cells |
| ASCs | Adult stem cells |
| iPSCs | Induced pluripotent stem cells |
| EMT | Epithelial–mesenchymal transition |
| CSE | Cigarette smoke extract |
| NNN | N-nitrosonornicotine |
| NNK | Nicotine-derived nitrosamine ketone |
| ECM | Extracellular matrix |
| PAHs | Polyaromatic hydrocarbons |
| AEC2 | Alveolar epithelial type II |
| AEC1 | Alveolar epithelial type I |
| SFTPC | Surfactant protein C |
| CF | Cystic fibrosis |
| HTBEC | Human tracheobronchial epithelial cells |
| FACS | Fluorescence-activated cell sorting |
| MACS | Magnetic-activated cell sorting |
| IPF | Idiopathic pulmonary fibrosis |
| BASCs | Bronchioalveolar stem cells |
| BMP4 | Bone morphogenetic protein 4 |
| NFATc1 | Nuclear factor of activated T cell c1 |
| TSP1 | Thrombospondin-1 |
| LBO | Lung bud organoid |
| Grhl2 | Grainyhead-like transcription factor 2 |
| STAT3 | Signal transducer and activator of the transcription 3 |
| DATPs | Damage-associated transient progenitors |
| TAZ | Transcriptional co-activator with PDZ-binding motif |
| YAP | Yes-associated protein |
| FGF | Fibroblast growth factor |
| BDNF | Brain-derived neurotrophic factor |
| TrkB | Receptor tropomyosin receptor kinase B |
| Th2 | T helper 2 |
| TGF-β | Transforming growth factor–β |
| FAM13A | Family with sequence similarity member 13A |
| AREG | Amphiregulin |
| EGFR | Epidermal growth factor receptor |
| FOXJ1 | Forkhead box protein J1 |
| FOXM1 | Forkhead box protein M1 |
| SPDEF | SAM pointed domain containing ETS transcription factor |
| PGE2 | Prostaglandin E2 |
| FAO | Fatty acid oxidation |
| RSV | Respiratory syncytial virus |
| SARS-CoV-2 | Severe acute respiratory syndrome coronavirus 2 |
| HPSIP | Hermansky–Pudlak syndrome (HPS)-associated interstitial pneumonia |
| BPE | Bovine pituitary extract |
| HBEC | Human bronchial epithelial cells |
| HMOX-1 | Heme oxygenase-1 |
| MTS | Mainstream tobacco smoke |
| RA | Retinoic acid |
| FC | Fibrosis cocktail |
| DTA | Diphtheria toxin A-chain |
| EGF | Epidermal growth factor |
| CPT1A | Carnitine palmitoyltransferase 1A |
| FBS | Fetal bovine serum |