| CS | Chemical structures |
| ATC | Anatomic Therapeutic Chemical |
| PPI | Protein-protein interaction |
| DTI | Drug-target interaction |
| ROC | Receiver operating characteristic |
| AUC | The area under the ROC curve |
| AUPR | The area under the precision-recall curve |
| TP | True positives |
| TPR | True positive Rate |
| FP | False positives |
| FPR | False positive Rate |