Table 2.
Details of the 40 MdTCP sequences classified in the present work. The table lists the name of the genes determined on the homology with AtTCPs and the corresponding accession number and gene name as described by Xu and co-authors [15]. See Supplementary Materials (Table S1) for full details.
| Proposed Gene Name (AtTCP-Based) |
GDDH13v1.1
Location 1 |
GDDH13v1.1
Accession |
Current Gene Name [15] |
|---|---|---|---|
| MdTCP1a | Chr17:5918494..5919692 | MD17G1073600 | / |
| MdTCP1b | Chr09:5829036..5829824 | MD09G1083300 | / |
| MdTCP1c | Chr09:5866332..5867581 | MD09G1083500 | / |
| MdTCP2a | Chr10:35355926..35362503 | MD10G1259500 | MdTCP8 |
| MdTCP2b | Chr05:41509298..41515345 | MD05G1281100 | MdTCP11 |
| MdTCP3a | Chr03:32434147..32436258 | MD03G1239100 | MdTCP27 |
| MdTCP3b | Chr11:37239267..37241971 | MD11G1258900 | MdTCP30 |
| MdTCP4a | Chr09:29080345..29082126 | MD09G1232700 | MdTCP25 |
| MdTCP4b | Chr17:28210166..28212381 | MD17G1233500 | MdTCP49 |
| MdTCP5a | Chr06:35690088..35691110 | MD06G1226300 | MdTCP15 |
| MdTCP5b | Chr14:29782365..29784375 | MD14G1213400 | MdTCP39 |
| MdTCP6a | Chr09:580205..581231 | MD09G1008300 | MdTCP22 |
| MdTCP6b | Chr17:174117..175642 | MD17G1002500 | MdTCP47 |
| MdTCP7a | Chr13:24219020..24221263 | MD13G1238400 | MdTCP28 |
| MdTCP7b | Chr16:26388679..26389521 | MD16G1243300 | MdTCP51 |
| MdTCP8a | Chr08:30628021..30630739 | MD08G1240000 | MdTCP21 |
| MdTCP8b | Chr15:53149356..53150897 | MD15G1431700 | MdTCP43 |
| MdTCP9a | Chr06:16974738..16975295 | MD06G1070100 | MdTCP12 |
| MdTCP9b | Chr04:9490696..9491838 | MD04G1069300 | MdTCP26 |
| MdTCP9-like_a | Chr02:18841493..18842398 | MD02G1196100 | MdTCP32 |
| MdTCP10a | Chr05:43753231..43753953 | MD05G1305100 | MdTCP5 |
| MdTCP10b | Chr10:37444923..37446820 | MD10G1284400 * | MdTCP29 |
| MdTCP12a | Chr13:3317170..3318603 | MD13G1047200 | MdTCP33 |
| MdTCP12b | Chr16:3451626..3453011 | MD16G1049000 | MdTCP45 |
| MdTCP13a | Chr09:4657685..4660115 | MD09G1068200 | MdTCP24 |
| MdTCP13b | Chr17:4956811..4958997 | MD17G1061100 | MdTCP48 |
| MdTCP14a | Chr06:32752924..32754201 | MD06G1191800 | MdTCP14 |
| MdTCP14b | Chr14:28826856..28828139 | MD14G1198200 | MdTCP38 |
| MdTCP15a | Chr13:5176600..5177805 | MD13G1073500 | MdTCP34 |
| MdTCP15b | Chr16:5227692..5228900 | MD16G1074800 | MdTCP46 |
| MdTCP17-like_a | Chr13:13829138..13829581 | / | MdTCP23 |
| MdTCP17-like_b | Chr12:2031066..2031509 | / | MdTCP52 |
| MdTCP17-like_c | Chr00:20520105..20525532 | / | MdTCP2 |
| MdTCP17-like_d | Chr07:8098897..8101110 | / | MdTCP17 |
| MdTCP18a | Chr06:34380518..34383361 | MD06G1211100 | MdTCP16 |
| MdTCP18b | Chr14:30342865..30345427 | MD14G1221800 | MdTCP40 |
| MdTCP19a | Chr01:29290241..29291342 | MD01G1194100 | MdTCP1 |
| MdTCP19b | Chr00:735426..737092 | MD00G1004900 | MdTCP18 |
| MdTCP20a | Chr13:9108309..9109998 | MD13G1122900 | MdTCP35 |
| MdTCP21a | Chr12:18364579..18365235 | MD12G1115100 | MdTCP31 |
1 In the event of sequences mapping onto a predicted gene, the location of the gene includes untranslated regions if present. * partially overlapping.