TABLE 3.
Amino acid sequence identities of VP4 proteins of strains 83/16F and 84/52F to those of rotaviruses belonging to various P typesa
| Strain (origin) | P genotype | P serotype | % Amino acid identity of VP4
|
|
|---|---|---|---|---|
| 83/16F | 84/52F | |||
| A5 (bovine) | 1 | 6 | 67 | 69 |
| SA11 (simian) | 2 | 67 | 69 | |
| RRV (simian) | 3 | 5B | 65 | 67 |
| K9 (canine) | 3 | 5A | 65 | 66 |
| RV-5 (human) | 4 | 1B | 58 | 57 |
| UK (bovine) | 5 | 7 | 99 | 97 |
| 61A (bovine) | 5 | 7 | 94 | 96 |
| B641 (bovine) | 5 | 7 | 91 | 93 |
| VMRI (bovine) | 5 | 7 | 93 | 95 |
| P343 (porcine) | 5 | 7 | 94 | 96 |
| M37 (human) | 6 | 2A | 56 | 55 |
| Gottfried (porcine) | 6 | 2B | 58 | 57 |
| OSU (porcine) | 7 | 9 | 60 | 60 |
| KU (human) | 8 | 1A | 58 | 56 |
| K8 (human) | 9 | 3A | 55 | 56 |
| 69M (human) | 10 | 4 | 66 | 70 |
| KK3 (bovine) | 11 | 8 | 39 | 43 |
| F123 (equine) | 12 | 62 | 64 | |
| Mc35 (human) | 13 | 3B | 55 | 55 |
| MDR13 (equine) | 14 | 59 | 61 | |
| Lp14 (ovine) | 15 | 67 | 67 | |
| Eb (murine) | 16 | 10 | 52 | 54 |
| 993/83 (bovine) | 17 | 33 | 34 | |
| L338 (equine) | 18 | 63 | 66 | |
| Mc345 (human) | 19 | 60 | 59 | |
| EHP (murine) | 20 | 66 | 66 | |
a
The fragment analyzed encompasses 130 residues of the VP8 subunit of the VP4 protein. The GenBank accession numbers of the VP4 genes from the following strains are indicated: A5, D13395; SA11, M23188; RRV, M18736; K9, D14725; RV-5, M32559; UK, M22306; 61A, D13396; B641, M63267; VMRI, U53923; P343, U35851; M37, L20887; Gottfried, M33516; OSU, X13190; KU, M21014; K8, D90260; 69M, M60600; KK3, D13393; F123, D16342; MDR13, L07886; Mc35, D14032; Lp14, L11599; Eb, L18992; 993/83, D16352; L338, D13399; Mc345, D38054; EHP, U08424. Strains with the same P type as strains 83/16F and 84/52F are boldfaced.