TABLE 1.
Primer sequences used for amplification of fragments derived from AIDA, F18, and Stx2e
Target region | Primer | Oligonucleotide sequence (5′→3′) | Product size (bp) | Reference |
---|---|---|---|---|
orfAa | UN19 | CTGGGTGACATTATTGCTTGG | 370 | This study |
UN20 | TTTGCTTGTGCGGTAGACTG | |||
orfBb | UN21 | TGCAAACATTAAGGGCTCG | 450 | This study |
UN22 | CCGGAAACATTGACCATACC | |||
orfBc | UN23 | CAGTTTATCAATCAGCTCGGG | 543 | This study |
UN24 | CCACCGTTCCGTTATCCTC | |||
fedAd | fedA1 | GTGAAAAGACTAGTGTTTATTTC | 230 | 10 |
fedA2 | CTTGTAAGTAACCGCGTAAGC | |||
stx2ee | Vte-a | CCTTAACTAAAAGGAATATA | 510 | 15 |
Vte-b | CTGGTGGTGTATGATTAATA |
Giving rise to a fragment from the coding region for ORFA.
Giving rise to a fragment from the coding region for AIDA-I (nucleotides 1014 to 1556).
Giving rise to a fragment from the coding region for AIDAC (nucleotides 3131 to 3580).
Giving rise to a fragment from the coding region for fedA, the major subunit of F18.
Giving rise to a fragment from the coding region for Stx2e.