TABLE 4.
Genes overrepresented in acid-resistant E. coli
| Gene cluster | Gene | Function |
|---|---|---|
| Ydj | ydjE | MFS transporter |
| ydjF | Putative deoR/GlpR family DNA-binding transcription regulator | |
| ydjG | Putative aldo/keto reductase or NADH-dependent methylglyoxal reductase | |
| ydjH | Carbohydrate kinase family protein or kinase, PfkB family | |
| ydjI | Ketose-bisphosphate aldolase | |
| ydjJ | Putative zinc-dependent dehydrogenase | |
| ydjK | Putative MFS transporter | |
| ydjL | Putative zinc-dependent dehydrogenase | |
| Xap | xapB | Xanthosine permease |
| xapR | Transcriptional activator | |
| Fec | fecA | Fe3+ outer membrane porin |
| fecI | RNA polymerase, sigma factor | |
| fecR | Regulator, periplasmic | |
| Ato | atoA | Acetoacetyl-CoA transferase, beta subunit |
| atoB | Acetyl-CoA acetyltransferase | |
| atoD | Acetoacetyl-CoA transferase, alpha subunit | |
| atoC | Regulatory protein | |
| atoE | Putative short-chain fatty acid transporter | |
| atoS | Signal transduction histidine-protein kinase | |
| NAa | ymjC | Putative oxidoreductase |
a
NA, not applicable.