TABLE 2.
KEGG enrichment of protein-protein network genes in CPE candidate genes
Gene | KEGG pathway | Description | Count in network | Strength | FDRb |
---|---|---|---|---|---|
Afu2g08660 | –a | – | – | – | – |
Afu3g13230 | – | – | – | – | – |
Afu3g13260 | map03440 | Homologous recombination | 3 of 19 | 2.15 | 2.05E–06 |
map03022 | Basal transcription factors | 4 of 30 | 2.08 | 7.44E–08 | |
map03420 | Nucleotide excision repair | 5 of 40 | 2.05 | 2.76E–09 | |
Afu3g13270 | map00565 | Ether lipid metabolism | 5 of 13 | 2.54 | 1.80E–11 |
map00564 | Glycerophospholipid metabolism | 11 of 49 | 2.31 | 1.64E–24 | |
map00561 | Glycerolipid metabolism | 5 of 31 | 2.16 | 5.88E–10 | |
map04144 | Endocytosis | 3 of 67 | 1.61 | 9.76E–05 | |
map01110 | Biosynthesis of secondary metabolites | 10 of 367 | 1.39 | 3.25E–13 | |
map01100 | Metabolic pathways | 9 of 934 | 0.94 | 6.17E–08 | |
Afu4g07080 | map03008 | Ribosome biogenesis in eukaryotes | 5 of 64 | 1.85 | 1.88E–08 |
Afu7g01440 | – | – | – | – | – |
Afu7g01560 | – | – | – | – | – |
–, No interactions found.
FDR, false discovery rate.