TABLE 1.
Prokka annotation features of 21 FPVs analyzeda
| No. | Fowlpox strain | Originb | Yr. of isolation | Phenotype | Sequences determined (bp) | Percent identityc (%) | Putative ORFs | Insertion of intact REV | GenBank accession no.d |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99866 | ROK, Ck | 1999 | Diphtheritic | 297,453 | 96.47 | 263 | Yes | MW558075 |
| 2 | 05113 | ROK, Ck | 2005 | Cutaneous | 297,389 | 96.45 | 263 | Yes | MW558074 |
| 3 | 10D392 | ROK, Ck | 2010 | Cutaneous | 297,482 | 96.50 | 256 | Yes | MW558065 |
| 4 | 13D121 | ROK, Ck | 2013 | Cutaneous | 297,322 | 96.60 | 264 | Yes | MW558066 |
| 5 | 14D047 | ROK, Ck | 2014 | Cutaneous | 297,407 | 96.74 | 262 | Yes | MW558067 |
| 6 | 15D039 | ROK, Ck | 2015 | Cutaneous | 297,159 | 96.31 | 257 | Yes | MW558068 |
| 7 | 18Q061 | ROK, Ck | 2018 | Diphtheritic | 296,964 | 96.59 | 262 | Yes | MW558069 |
| 8 | 18R056 | ROK, Ck | 2018 | Diphtheritic | 297,398 | 96.74 | 263 | Yes | MW558070 |
| 9 | 18R059 | ROK, Ck | 2018 | Diphtheritic | 297,431 | 96.73 | 263 | Yes | MW558071 |
| 10 | 19D064 | ROK, Ck | 2019 | Cutaneous | 297,250 | 96.38 | 262 | Yes | MW558072 |
| 11 | 2755 | USA, Ck | <1963 | unk | 297,405 | 96.91 | 265 | Yes | MW558073 |
| 12 | USDA_2000e | USA, Ck | 1999 | unk | 288,872 | 261 | No | AF198100 | |
| 13 | MN00.2e | USA, Tk | 2000 | unk | 298,798 | 96.20 | 264 | Yes | MH709124 |
| 14 | SD15-670.2e | USA, Tk | 2015 | Cutaneous | 295,937 | 96.04 | 265 | Yes | MH734528 |
| 15 | FP9e | Germany Munich | 1960s | unk | 266,145 | 89.15 | 253 | No | AJ581527 |
| No. | Vaccine strain | Origin | Yr. of permit | Manufacturer | Sequences determined (bp) | Percent identity (%) | Putative ORFs | Insertion of intact REV | GenBank accession no. |
| 16 | V-CMP | 2755 | 1976 | Komipharm | 287,251 | 90.73 | 259 | No | MW558078 |
| 17 | V-DS | 2755 | 1969 | DSMbio | 287,618 | 92.14 | 258 | No | MW558079 |
| 18 | V-KR | 2755 | 1985 | KBNP | 292,650 | 89.20 | 260 | No | MW558080 |
| 19 | V-JA | Cutter | 1974 | CAVAC | 288,501 | 99.97 | 264 | No | MW558081 |
| 20 | V-POXINE | unk | 1982 | Zoetis | 295,688 | 97.46 | 262 | No | MW558076 |
| 21 | V-BLEN | Cutter | 1980 | Boehringer-Ingelheim | 291,194 | 98.58 | 256 | No | MW558077 |
Virus identified, origin, sequence size, GenBank accession number.
ROK, Republic of Korea; Ck, chicken; Tk, turkey; unk, unknown.
Percent identities were calculated by the pairwise comparison between 20 strains and USDA_2000.
Complete genome sequences of 17 FPVs have been submitted to GenBank under accession numbers MW558065–MW558081.
We used reported nucleotide sequences for fowlpox USDA_2000, FWPV-MN00.2, FWPV-SD15-670.2, and FP9(HP-438p).