TABLE 2.
Summary of the comparative analysis of 40 putative proteins of FPV (see Table S1 for full details)
| Genetic variation (amino acid mutation and/or insertion and/or deletion) | Gene | FPV ORF |
|---|---|---|
| Geographically distinct between Korean strain versus US strain | α-SNAP | 11 |
| V-type Ig domain | 17 | |
| Ankyrin repeat gene family protein | 18a, 115, 216, 223, 230, 242–243 | |
| G protein-coupled receptor gene | 27b | |
| Transforming growth factor-β | 80a | |
| DNA polymerase | 94c | |
| N1R/p28 gene family | 124b | |
| Late transcription factor VLTF-4 | 142 | |
| Molluscum contagious virus MC089L | 145b | |
| Immunodominant virion protein | 168b | |
| C-type lectin gene | 239b | |
| Common to four attenuated strains (V-CMP, V-DS, V-KR and FP9) | G protein-coupled receptor gene | 27b |
| Phosphopantothenate-cysteine | 71 | |
| DNA polymerase | 94c | |
| Variola B22R | 97 | |
| N1R/p28 gene family | 124b | |
| Molluscum contagious virus MC089L | 145b | |
| Immunodominant virion protein | 168b | |
| Early transcription factor, VETF-L | 171 | |
| A type inclusion protein | 190, 191 | |
| Ankyrin repeat gene family protein | 219 | |
| C-type lectin gene | 239b | |
| Unique in the diphtheritic type strains | Ankyrin repeat gene family protein | 18a, 26 |
| Transforming growth factor-β | 80a | |
| DNA polymerase | 94c | |
| Variola B22R | 98, 122 |
ORF18 and 80 have genetic variations showing in the geographically distinct of FPVs and in only diphtheritic type strains.
ORF 27, 124, 145, 168, and 239 have genetic differences showing in the geographically distinct and common to the attenuated strains.
ORF 94 has genetic difference relating geographically distinct, showing in only diphtheritic type strains and common to the attenuated strains.