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. 2022 Aug 24;10(5):e02641-21. doi: 10.1128/spectrum.02641-21

TABLE 1.

SARS-CoV-2 VOC Delta Brazilian data seta

Location Amount
 Main amount
 BR-I
 AY.101
 AY.46.3
No. % Sampling range (mo/yr) No. % No. % No. % No. %
N AM 18 0.80 07/21–08/18 18 1.17
AP 3 0.13 08/03–08/05 3 0.19
PA 1 0.04 07/28 1 0.29
TO 1 0.04 07/13 1 0.58
TOTAL 23 1.02 07/21–08/18 1 0.29 21 1.36 1 0.58
NE AL 5 0.22 07/13–08/09 2 0.13 2 0.98 1 0.58
BA 5 0.22 07/21–08/18 5 0.32
CE 19 0.84 07/21–08/02 6 1.75 13 0.84
MA 5 0.22 05/16 5 1.46
PB 21 0.93 07/21–08/13 21 1.36
PI 1 0.04 08/09 1 0.06
PE 13 0.57 07/02–08/05 6 1.75 7 0.45
RN 1 0.04 08/09 0.00 1 0.06
TOTAL 70 3.09 07/13–08/18 17 4.96 50 3.24 2 0.98 1 0.58
CW GO 52 2.30 04/27–08/24 18 5.25 31 2.01 1 0.49 2 1.17
MT 1 0.04 07/28 1 0.06
TOTAL 53 2.34 04/27–08/24 18 5.25 32 2.07 1 0.49 2 1.17
S PR 101 4.46 04/26–08/04 12 3.50 89 43.41
RS 69 3.05 06/17–08/13 3 0.87 27 1.75 36 17.56 3 1.75
SC 65 2.87 06/25–08/02 9 2.62 19 1.23 36 17.56 1 0.58
TOTAL 235 10.38 04/26–08/13 24 7.00 46 2.98 161 78.54 4 2.34
SE ES 20 0.88 07/05–08/06 2 0.58 18 1.17
MG 32 1.41 05/22–08/12 3 0.87 29 1.88
RJ 745 32.91 05/22–08/17 10 2.92 732 47.38 2 0.98 1 0.58
SP 1086 47.97 05/22–08/23 268 78.13 617 39.94 39 19.02 162 94.74
TOTAL 1883 83.17 05/22–08/13 283 82.51 1,396 90.36 41 20.00 163 95.32
BR TOTAL 2264 100 05/22–08/23 343 100 1,545 100 205 100 171 100
a

The table details the VOC Delta (B.1.617.2+AY*) data set (n = 2,264) of Brazilian sequences and their placement in a maximum likelihood topology. For each state, the sampling range and distribution of their sequences across the main tree and the three major Brazilian clusters (BR-I, AY.101, and AY.46.3) are detailed. CW, central-western; N, northern; NE, northeastern; S, southern; SE, southeastern; AM, Amazonas; AP, Amapá; PA, Pará; TO, Tocantins; AL, Alagoas; BA, Bahia; CE, Ceará; ES, Espírito Santo; MA, Maranhão; MG, Minas Gerais; PB, Paraíba; PI, Piauí; PE, Pernambuco; RJ, Rio de Janeiro; RN, Rio Grande do Norte; GO, Goiânia; MT, Mato Grosso; PR, Paraná; RS, Rio Grande do Sul; SC, Santa Catarina; SP, São Paulo.