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. 2022 Sep 14;30(9):1219–1230.e7. doi: 10.1016/j.chom.2022.07.014
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Alkaline phosphatase conjugated goat anti-mouse IgG (Fc specific) Sigma A1418

Chemicals, peptides, and recombinant proteins

n-octyl-β-d-glucoside Generon O311S
A8-35 amphipol Anatrace A835
RABV-G wt protein C-tagged This paper Based on Addgene #74288
RABV-G H270P mutant protein This paper Based on Addgene #74288
1112-1 IgG and Fab This paper N/A
RVC20 IgG and Fab This paper N/A
17C7 IgG and Fab This paper N/A
RVC58 Fab This paper N/A
Mouse polyclonal serum from mice immunized with Rabipur rabies vaccine This paper N/A

Critical commercial assays

Pierce Mouse IgG1 Fab and F(ab')2 Preparation kit ThermoFisher Scientific 44980
ExpiFectamine™ 293 Transfection Kit ThermoFisher Scientific A14524
Alexa Fluor 647 conjugation kit ThermoFisher Scientific A20186
EnduRen substrate Promega E6481
Horseradish-peroxidase-conjugated Streptactin Iba Life Sciences 2-1502-001

Deposited data

Structure of RABV-G in complex with 17C7 and 1112-1 Fabs PDB ID: 8A1E https://www.wwpdb.org/
Map of RABV-G in complex with 17C7 and 1112-1 Fabs EMDB ID: EMD-15073 https://www.emdataresource.org/

Experimental models: Cell lines

Expi293F cells ThermoFisher Scientific A14527
GripTite™ 293 MSR ThermoFisher Scientific R79507
1112-1 hybridoma Wistar Institute, USA N/A
RABV-G H270P-mutant protein stable cell line This paper based on Elegheert et al. (2018) N/A

Oligonucleotides

Primers for RABV-G sequence amplification from Addgene plasmid #74288:
F: TAGTAGGCGGCCGCCATG
GTCCCACAGGCTCTCC
R: TAGTAGTCTAGATTTACGCTTC
CGGTTCGAGCCGTGTCTCGCCCCC
This paper N/A

Recombinant DNA

pVIP-ENTR Balazs et al., 2013 N/A
pOPINVH Nettleship et al., 2008 Addgene #26041
pOPINVL Nettleship et al., 2008 Addgene #26040
pHR-CMV-TetO2-3C-Twin-Strep-IRES-Turquoise2 Elegheert et al., 2018 Addgene #113886
Plasmids for heavy and light chains of 1112-1 Fab Synthesized N/A
Plasmids for heavy and light chains of RVC20 Fab Synthesized based on patent WO2016078761
Plasmids for heavy and light chains of RVC20 IgG Synthesized based on patent WO2016078761
Plasmids for heavy and light chains of 17C7 Fab Synthesized based on patent WO2006084006
Plasmids for heavy and light chains of 17C7 IgG Synthesized based on patent WO2006084006
Plasmids for heavy and light chains of RVC58 Fab Synthesized based on patent WO2016078761
pDSP1-7 Synthesized based on Kondo et al. (2010) N/A
pDSP8-11 Synthesized based on Kondo et al. (2010) N/A
Plasmid for RABV-G wt protein C-tagged Modified with C-tag, based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G wt protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP wt protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H20L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H20A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H21L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H21A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H86L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H86A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H113L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H113A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H150A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H150L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H173L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H173A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H261L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H261A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H261L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H303L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H303A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H328A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H397A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H397L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H419A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H419L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H424L mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H424A mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G I268P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP E269P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H270P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP H270P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G L271P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G-GFP L271P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G L272P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288
Plasmid for RABV-G H384P mutant protein Synthesized based on sequence from Kim et al. (2016) Based on Addgene #74288

Software and algorithms

ImageJ (Schneider et al., 2012) https://imagej.nih.gov/ij/
cryoSPARC Punjani et al. (2017) https://cryosparc.com/
COOT v.0.8.9.2 Emsley and Cowtan (2004) https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
Phenix v.1.19.2 Adams et al. (2002) https://phenix-online.org/
MolProbity v.4.5.1 Chen et al. (2010) http://molprobity.biochem.duke.edu/
FlowJo v10 software BD Biosciences https://www.flowjo.com/
Biacore S200 v2 Evaluation software Cytiva N/A
Prism 9.0 GraphPad Software https://www.graphpad.com/
PyMOL Schrodinger pymol.org
UCSF Chimera/Chimera X Pettersen et al., 2004; Pettersen et al., 2021 https://www.cgl.ucsf.edu/chimera/; https://www.rbvi.ucsf.edu/chimerax/
BioRender BioRender https://biorender.com/

Other

96-well white tissue culture plates PerkinElmer 6005680
μ-Plate black 96-well plates Ibidi 89626
CM5 chip Cytiva 29104988
Biacore S200 instrument Cytiva N/A
Strep-Tactin®XT 4Flow® high capacity cartridge Iba Life Sciences 2-5027-001