Skip to main content
. 2022 Oct 13;12:975408. doi: 10.3389/fonc.2022.975408

Table 1.

Sequence optimization score of the optimized and original sequences.

CAI GC% Negativecis-acting elements Negative repeat elements
Optimized OX40L sequence 0.93 55.7 0 0
Original OX40L sequence from NM_003326 0.54 46.3 1 0

aCodon usage bias was adjusted to fit the highest expression profile of the target host. A CAI (Codon Adaptation Index) of 0.8 - 1.0 is regarded as good for high expression.

bRepeated area in the original sequences were removed to avoid stem-loop structures in mRNA and facilitate the synthesis process.

cUndesired motif including restriction enzyme site to be used in sub-cloning and negative cis-acting sites were modified.

dWhole sequence was fine-tune to increase the translation efficiency and prolong the half-life of mRNA.