Table 1.
Clinical characteristics of patients involved in the study.
Characteristics | Training cohort TCGA-LUAD, n = 500) | Validation cohort one (GSE72094, n = 398) | Validation cohort two (GSE68465, n = 442) |
---|---|---|---|
Age | |||
<65 | 219 (43.8%) | 107 (26.88%) | 214 (48.42%) |
>=65 | 271 (54.2%) | 291 (73.12%) | 228 (51.58%) |
Unknown | 10 (2%) | 0 | 0 |
Gender | |||
Female | 270 (54%) | 222 (55.78%) | 219 (49.55%) |
Male | 230 (46%) | 176 (44.22%) | 223 (50.45%) |
Race | |||
White | 386 (77.2%) | 377 (94.72%) | 294 (66.52%) |
Non-White | 60 (12%) | 18 (4.52%) | 19 (4.29%) |
Unknown | 54 (10.8%) | 3 (0.75%) | 129 (29.19%) |
Ethnicity | |||
Hispanic or Latino | 7 (1.4%) | 9 (2.26%) | NA |
Non-Hispanic or Latino | 381 (76.2%) | 381 (95.73%) | NA |
Unknown | 112 (22.4%) | 8 (2.01%) | NA |
Tumor stage | |||
Stage I | 268 (53.6%) | 254 (63.82%) | NA |
Stage II | 119 (23.8%) | 67 (16.83%) | NA |
Stage III | 80 (16%) | 57 (14.32%) | NA |
Stage IV | 25 (5%) | 15 (3.77%) | NA |
Unknown | 8 (1.6%) | 5 (1.26%) | NA |
T classification | |||
T1 | 167 (33.4%) | NA | 150 (33.94%) |
T2 | 267 (53.4%) | NA | 251 (56.79%) |
T3 | 45 (9%) | NA | 28 (6.33%) |
T4 | 18 (3.6%) | NA | 11 (2.49%) |
Unknown | 3 (0.6%) | NA | 2 (0.45%) |
Prior malignancy | |||
Yes | 79 (15.8%) | NA | NA |
No | 421 (84.2%) | NA | NA |
Tissue origin | |||
Upper lobe lung | 291 (58.2%) | NA | NA |
Non-upper lobe lung | 209 (41.8%) | NA | NA |
Smoking history | |||
Ever | 415 (83%) | 300 (75.38%) | 300 (67.87%) |
Never | 71 (14.2%) | 31 (7.79%) | 49 (11.09%) |
Unknown | 14 (2.8%) | 67 (16.83%) | 93 (21.04%) |
KRAS mutation | |||
Yes | NA | 139 (34.92%) | NA |
No | NA | 259 (65.08%) | NA |
TP53 mutation | |||
Yes | NA | 97 (24.37%) | NA |
No | NA | 301 (75.63%) | NA |
EGFR mutation | |||
Yes | NA | 41 (10.3%) | NA |
No | NA | 357 (89.7%) | NA |
STK11 mutation | |||
Yes | NA | 64 (16.08%) | NA |
No | NA | 334 (83.92%) | NA |
Vital status | |||
Alive | 318 (63.6%) | 285 (71.61%) | 206 (46.61%) |
Dead | 182 (36.4%) | 113 (28.39%) | 236 (53.39%) |