Table 1. Thermal Denaturation Transitions of All Possible Duplex Combinations, Recorded at 260 nma.
| entry | duplex | Tm | Tm2 |
|---|---|---|---|
| 1 | 1:5 | 62.5 ± 0.4 | |
| 2 | 2:5 | 59.2 ± 2.1 | |
| 3 | 3:5 | 56.1 ± 1.2 | |
| 4 | 4:5 | 47.1 ± 5.6 | 23.4 ± 2.6 |
| 5 | 1:6 | 55.4 ± 0.6 | |
| 6 | 1:7 | 47.1 ± 1.1 | 26.1 ± 1 |
| 7 | 2:6 | 50.9 ± 1.6 | < 33 |
| 8 | 2:7 | 25.1 ± 0.6 | |
| 9 | 3:6 | 54.4 ± 2.4 | < 28 |
| 10 | 3:7 | < 24 | |
| 11 | 4:7 | < 25 |
All measurements were carried out in triplicate. Samples of all traces are provided within Supporting Information (Figure S26); entries with a < sign did not display a clear sigmoidal shape. [RNA duplex] = 2.5 μM, [NaCl] 10 mM, [MgCl2] = 5 mM, [Na3PO4] = 10 mM, pH 7.2.