Table 4. Thermal Denaturation Transitions of Duplex 8:9 or 10:11, Recorded at 260 nma.
| duplex 8:9 |
duplex 10:11 |
|||||||
|---|---|---|---|---|---|---|---|---|
| entry | [MgCl2] | [NaCl] | Tm | entry | [MgCl2] | [NaCl] | Tm | Tm2 |
| 32 | 5 mM | 0.01–3.6 M | 64.6 ± 1.1 | 40 | 5 mM | 10 mM | 33.8 ± 0.7 | |
| 33 | 10 mM | 46.1 ± 0.7 | 41 | 5 mM | 0.1–2 M | 59.4 ± 2.4 | ||
| 34 | 0.7–2.5 M | 65.7 ± 0.8 | 42* | 5 mM | 2.5–4.7 M | 76.1 ± 3.1 | 86.1 ± 1.1 | |
| 35 | 3.6 M | 62.5 ± 0.5 | 43* | 0.75 M | 69.6 ± 0.9 | |||
| 44* | 1.5 M | 74.1 ± 0.3 | ||||||
| 45* | 2.5 M | 48.9 ± 0.3 ↑ | 79.6 ± 2.1 | |||||
| 46* | 3.5 M | 46.3 ± 0.3 ↑ | > 80 | |||||
| [NaClO4] | [NaClO4] | |||||||
| 36 | 0.1 M | 56.1 ± 1.3 | 47 | 5 mM | 0.1–2.5 M | 34.1 ± 3.9 ↓ | 62.3 ± 2.2 | |
| 48 | 5 mM | 4.7 M | 23.1 ± 9.6 | 51.9 ± 0.6 | ||||
| 37 | 1 M | 59.3 ± 0.8 | 49* | 1 M | 64.7 ± 0.7 | |||
| 38 | 2.7 M | 45.2 ± 1.1 | 50* | 2.7 M | 61.8 ± 0.6 | |||
| 39 | 5.4 M | 21.8 ± 1.8 | 51* | 5.4 M | 50.1 ± 0.5 | |||
All measurements were carried out in duplicate, in the absence of Mg. Entries with a (*) indicate instances that display increased thermal stability, compared to the canonical analogue.