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. 2022 Oct 19;11(20):2760. doi: 10.3390/plants11202760

Figure 2.

Figure 2

Phylogenetic tree generated by maximum likelihood analysis (RAxML) of FIESC based on the combined CaM, rpb2 and tef1 sequence data. The tree is rooted with Fusarium concolor (CBS 961.87). The best-scoring RAxML tree with a final likelihood value of –11,974.052080 is presented. The matrix had 701 distinct alignment patterns, with 7.69% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.258901, C = 0.260331, G = 0.245699, T = 0.235069; substitution rates AC = 1.002698, AG = 4.065670, AT = 1.349366, CG = 0.882966, CT = 10.506153, GT = 1.000000; gamma distribution shape parameter α = 0.751525. ML bootstrap support values ≥50% and Bayesian posterior probabilities (BYPP) ≥ 0.95 are given near the nodes. The scale bar indicates 0.03 changes per site. Isolates belonging to this study are given in red.