Skip to main content
. 2022 Oct 19;11(20):2760. doi: 10.3390/plants11202760

Figure 5.

Figure 5

Phylogenetic tree generated by maximum likelihood analysis (RAxML) of FOSC based on the combined rpb2, tef1 and tub2 sequence data. The tree is rooted with Fusarium foetens (CBS 120665) and Fusarium udum (CBS 177.31). The best-scoring RAxML tree with a final likelihood value of −4987.801452 is presented. The matrix had 199 distinct alignment patterns, with 0.90% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.251044, C = 0.269288, G = 0.238899, T = 0.240769; substitution rates AC = 1.155437, AG = 2.887244, AT = 0.424595, CG = 0.728892, CT = 5.651969, GT = 1.000000; gamma distribution shape parameter α = 1.022063. ML bootstrap support values ≥50% and Bayesian posterior probabilities (BYPP) ≥ 0.95 are given near the nodes. The scale bar indicates 0.02 changes per site. Isolates belonging to this study are given in red.