Table 2.
Key LncRNAs related to up and down-regulated genes in brain metastasis patients (lncHUB lncRNA Co-Expression database).
| LncRNA | Up-regulated genes | LncRNA | Up-regulated genes | LncRNA | Down-regulated genes |
|---|---|---|---|---|---|
| BDNF-AS | IGIP; PCDHGA9 | LINC02712 | SIGLEC8; PCDHGA9 | FGF10-AS1 | AMFR; CYBRD1 |
| RASSF8-AS1 | IGIP; PCDHGA9 | LINC00501 | TMEM176B; TMEM176A | LINC02115 | AMFR; CYBRD1 |
| TMEM161B-AS1 | IGIP; PCDHGA9 | LACTB2-AS1 | TMEM176B; TMEM176A | LINC01716 | AMFR; ZIM2 |
| NNT-AS1 | IGIP; PCDHGA9 | C1RL-AS1 | TMEM176B; TMEM176A | MYO16-AS1 | ANXA3; FAM83A |
| SEPTIN7-AS1 | IGIP; PCDHGA9 | LINC02068 | TMEM176B; TMEM176A | LINC00424 | ANXA3; ITLN1 |
| PSMG3-AS1 | IGIP; PCDHGA9 | LINC01853 | TMEM176B; TMEM176A | LINC00560 | ANXA3; ITLN1 |
| BACE1-AS | IGIP; PCDHGA9 | LINC01504 | TMEM176B; TMEM176A | CTNNA2-AS1 | CRB1; PNMA2 |
| GRID1-AS1 | IGIP; PCDHGA9 | FBXO3-DT | TMEM176B; TMEM176A | LINC01114 | CRB1; PNMA2 |
| LINC00909 | IGIP; PCDHGA9 | LINC01843 | TMEM176B; TMEM176A | LINC02520 | CRB1; ZIM2 |
| LINC01511 | LGSN; MYOM2 | LINC02384 | TMEM176B; TMEM176A | LINC01701 | FAM83A; CTSB |
| LINC02864 | LGSN; TRIP13 | OVOL1-AS1 | TMEM176B; TMEM176A | LINC01288 | MAOB; ZIM2 |
| LPP-AS2 | LPAR3; ZNF599 | SMIM2-AS1 | TMEM176B; TMEM176A | ARHGEF2-AS1 | OCLN; ANXA3 |
| TMCO1-AS1 | PIGC; ZNF599 | LBX2-AS1 | TMEM176B; TMEM176A | NKX2-1-AS1 | OCLN; CTSB |
| LINC00448 | PRAMEF20; MYOM2 | CPNE8-AS1 | TMEM176B; TMEM176A | LINC01806 | OCLN; CTSB |
| LINC01736 | SIGLEC8; PCDHGA9 | ERVK9-11 | TMEM176B; TMEM176A | SCN1A-AS1 | PNMA2; ABCA13 |
| LINC02015 | TMEM176B; TMEM176A | LINC02712 | SIGLEC8; PCDHGA9 | SAP30-DT | PNMA2; SLC2A5 |
| LINC01880 | TMEM176B; TMEM176A | LINC01999 | TMEM176B; TMEM176A | HHLA3-AS1 | XK; ITLN1 |
| LINC02244 | TMEM176B; TMEM176A | LINC02538 | TMEM176B; TMEM176A | LINC02703 | ZNF608; SLC2A5 |
| LINC02011 | TMEM176B; TMEM176A | HNF1A-AS1 | TMEM176B; TMEM176A | ||
| SMIM2-IT1 | TMEM176B; TMEM176A | LINC01386 | TRIP13; PIGW | ||
| LINC01781 | TMEM176B; TMEM176A | SMAD9-IT1 | ZNF827; IGIP | ||
| LINC01506 | TMEM176B; TMEM176A | EDNRB-AS1 | ZNF827; PCDHGA9 | ||
| LINC02532 | TMEM176B; TMEM176A |