Table 2.

Key LncRNAs related to up and down-regulated genes in brain metastasis patients (lncHUB lncRNA Co-Expression database).

LncRNA	Up-regulated genes	LncRNA	Up-regulated genes	LncRNA	Down-regulated genes
BDNF-AS	IGIP; PCDHGA9	LINC02712	SIGLEC8; PCDHGA9	FGF10-AS1	AMFR; CYBRD1
RASSF8-AS1	IGIP; PCDHGA9	LINC00501	TMEM176B; TMEM176A	LINC02115	AMFR; CYBRD1
TMEM161B-AS1	IGIP; PCDHGA9	LACTB2-AS1	TMEM176B; TMEM176A	LINC01716	AMFR; ZIM2
NNT-AS1	IGIP; PCDHGA9	C1RL-AS1	TMEM176B; TMEM176A	MYO16-AS1	ANXA3; FAM83A
SEPTIN7-AS1	IGIP; PCDHGA9	LINC02068	TMEM176B; TMEM176A	LINC00424	ANXA3; ITLN1
PSMG3-AS1	IGIP; PCDHGA9	LINC01853	TMEM176B; TMEM176A	LINC00560	ANXA3; ITLN1
BACE1-AS	IGIP; PCDHGA9	LINC01504	TMEM176B; TMEM176A	CTNNA2-AS1	CRB1; PNMA2
GRID1-AS1	IGIP; PCDHGA9	FBXO3-DT	TMEM176B; TMEM176A	LINC01114	CRB1; PNMA2
LINC00909	IGIP; PCDHGA9	LINC01843	TMEM176B; TMEM176A	LINC02520	CRB1; ZIM2
LINC01511	LGSN; MYOM2	LINC02384	TMEM176B; TMEM176A	LINC01701	FAM83A; CTSB
LINC02864	LGSN; TRIP13	OVOL1-AS1	TMEM176B; TMEM176A	LINC01288	MAOB; ZIM2
LPP-AS2	LPAR3; ZNF599	SMIM2-AS1	TMEM176B; TMEM176A	ARHGEF2-AS1	OCLN; ANXA3
TMCO1-AS1	PIGC; ZNF599	LBX2-AS1	TMEM176B; TMEM176A	NKX2-1-AS1	OCLN; CTSB
LINC00448	PRAMEF20; MYOM2	CPNE8-AS1	TMEM176B; TMEM176A	LINC01806	OCLN; CTSB
LINC01736	SIGLEC8; PCDHGA9	ERVK9-11	TMEM176B; TMEM176A	SCN1A-AS1	PNMA2; ABCA13
LINC02015	TMEM176B; TMEM176A	LINC02712	SIGLEC8; PCDHGA9	SAP30-DT	PNMA2; SLC2A5
LINC01880	TMEM176B; TMEM176A	LINC01999	TMEM176B; TMEM176A	HHLA3-AS1	XK; ITLN1
LINC02244	TMEM176B; TMEM176A	LINC02538	TMEM176B; TMEM176A	LINC02703	ZNF608; SLC2A5
LINC02011	TMEM176B; TMEM176A	HNF1A-AS1	TMEM176B; TMEM176A
SMIM2-IT1	TMEM176B; TMEM176A	LINC01386	TRIP13; PIGW
LINC01781	TMEM176B; TMEM176A	SMAD9-IT1	ZNF827; IGIP
LINC01506	TMEM176B; TMEM176A	EDNRB-AS1	ZNF827; PCDHGA9
LINC02532	TMEM176B; TMEM176A