Table 4.
Identification of Plasmid mediated AMR genes in ESBL E. coli sequence.
| Sr. No. | Category | AMR genes | Identity % | Alignment length | Position in contigs | Phenotype | Accession Number |
|---|---|---|---|---|---|---|---|
| 1 | Quinolone | qnrS1 | 100 | 657/657 | 4197038.4197694 | Ciprofloxacin | AB187515 |
| 2 | Tetracycline | Tet(A) | 99.91 | 1200/1200 | 4191184.4192383 | Doxycycline/ tetracycline | AJ517790 |
| 3 | Folate pathway antagonist | Sul2 | 100 | 816/816 | 3478115.3478930 | Sulfamethoxazole | AY034138 |
| 4 | dfA14 | 100 | 474/474 | 3479539.3480012 | Trimethoprim | AF393510 | |
| 5 | Aminoglycoside | aph(3″)-lb | 100 | 529/804 | 3478991.3479519 | Streptomycin | AF321551 |
| 6 | aph(6)-ld | 99.86 | 726/837 | 3478991.3479519 | Streptomycin | AF024602 | |
| 7 | Aph(3′)-la | 100 | 816/816 | 4742471.4743286 | Neomycin,Kanamycin,lividomycin, paromomycin, ribostamycin | V00359 |