Skip to main content
. 2022 Oct 27;17:394. doi: 10.1186/s13023-022-02542-z

Table 2.

The known and likely pathogenic mutations of Brugada syndrome and long QT syndrome

ID DS Chr Start Gene Amino acid change Het 1000 g/Esp SIFT Polyphen Clinic ACMG Evidence dbSNP
2 LQTs chr11 2,604,664 KCNQ1 NM_000218:exon7:c.922-1G > C  ±  P P PVS1, PM2_Supporting, PP4, PP1 rs387906290
5 Brs chr3 38,598,739 SCN5A NM_001160161:exon23:c.G4120T:p.A1374S  ±  0.001 0.00(D) 1.00(D) LP VUS PM2_Supporting, PM1, PP3 rs200034939
8 Brs chr3 38,640,451 SCN5A NM_000335:exon13:c.C1981T:p.R661W  ±   < 0.001 0.00(D) 1.00(D) P VUS PM2_Supporting, PP3 rs199473139
10 Brs chr3 38,622,757 SCN5A NM_000335:exon17:c.C2893T:p.R965C  ±  0.001 0.00(D) 1.00(D) LP VUS PM2_Supporting, PS4_M, PS3_Supporting, PP3 rs199473180
11 Brs chr18 29,116,333 DSG2 NM_001943:exon11:c.T1592G:p.F531C  ±  0.00(D) 1.00(D) LP LP PM2_Supporting, PM3_Strong, PS3_Supporting rs200484060
chr3 38,598,739 SCN5A NM_001160161:exon23:c.G4120T:p.A1374S  ±  0.001 0.00(D) 1.00(D) LP VUS PM2_Supporting, PS4_Supporting, PP3 rs200034939
13 LQTs chr3 38,592,170 SCN5A NM_001099405:exon27:c.G5639A:p.R1880H  ±   < 0.001 0.06(T) 0.99(D) P VUS PM2_Supporting, PS4_Supporting, PP3 rs370694515
18 Brs chr7 150,644,473 KCNH2 NM_172057:exon9:c.G2075A:p.R692Q  ±  0.001 0.58(T) 1.00(D) LP VUS PM2_Supporting, PP2 rs199473020
19 LQTs chr11 2,604,664 KCNQ1 NM_000218:exon7:c.922-1G > C  ±  P P PVS1, PM2_Supporting, PP4, PP1 rs387906290
21 LQTs chr7 150,649,569 KCNH2 NM_001204798:exon2:c.G481A:p.D161N ±  0.00(D) 1.00(D) P LP PM2_Supporting, PS4_M, PS3_Supporting, PP2, PP3 rs199472912
22 LQTs chr11 2,593,286 KCNQ1 NM_000218:exon5:c.C727A:p.R243S  ±  0.00(D) 1.00(D) P LP PM2_Supporting, PM5, PM1, PP3 rs199472713

DS diseases, LQTs long QT syndrome, Brs Brugada syndrome, Chr chromosome, 1000G/Esp 1000genomes (2015 version) or Esp6500 database, SNP single nucleotide polymorphism, PP polyphen-2, D damaging, B benign, T tolerated, ± heterozygous carrier, P pathogenic, LP likely pathogenic, – no report