Table 2:

Number of regions detected on the two-tissue and one-tissue designs, for one-sided α/2 = 0.05 tests. Data in the one-tissue were split randomly into two groups, so we consider all detections to be false positives. Estimated covariance ${\widehat{\Sigma }}^{\lambda }$ were used with λ = 0.15.

		Permutation	Pin-down
	Regions found	$\mathit{FW\; E}<\frac{\alpha }{2}$	$\mathit{p}<\frac{\alpha }{2}$	$p_{\mathit{Bon\; f}}<\frac{\alpha }{2}$	$p_{\mathit{BH}}<\frac{\alpha }{2}$
Two tissue	58298	61 (.07%)	51598 (89%)	36513 (63%)	51394 (88%)
One tissue	1578	0	49 (3%)	0	0