Antibodies |
|
CD3 |
Abcam |
SP7, ab16669; RRID: AB_443425
|
CD45 |
Biopharmingen |
Clone 30-F11, #553076; RRID: AB_394606
|
EMB |
In-house (Stephen L. Nutt), Pridans et al., 2008
|
G7.43.1 |
F4/80 |
BioLegend |
BM8, #123115; RRID: AB_893493
|
FASN |
Santa Cruz Biotechnology |
G-11, sc48357; RRID: AB_627584
|
FN |
Abcam |
ab2413; RRID: AB_2262874
|
GATA6 |
Cell Signalling |
D61 E4 clone, #5851; RRID: AB_10705521
|
GST (Delfia Eu-N1-anti-GST) |
PerkinElmer |
AD0251 |
ITGα6-FITC |
eBioscience |
GoH3 clone, 14-0495-82; RRID: AB_891480
|
K14 |
BioLegend |
Poly19053; #905303; RRID: AB_2734678
|
Ki67 |
Abcam |
SP6, ab16667; RRID: AB_302459
|
Laminin |
Sigma |
L9393; RRID: AB_477163
|
LRIG1 |
R&D Biosystems |
#AF3688; RRID: AB_2138836
|
MCT1 |
Millipore |
AB1286-1; RRID: AB_90565
|
PPARγ |
Santa Cruz Biotechnology |
E-8, sc7273; RRID: AB_628115
|
SCD1 |
Cell Signaling |
C12H5, #2794; RRID: AB_2183099
|
SCD1 |
R&D Biosystems |
Clone#428208, #MAB4404; RRID: AB_2183118
|
|
Bacterial and virus strains |
|
BL21Tuner |
Novagen (Sigma- Aldrich) |
70622-M |
BL21Tuner-pGex-2T-Embigin ecto |
This paper |
N/A |
BL21Tuner-pGex-2T-Neuroplastin ecto |
This paper |
N/A |
BL21Tuner-pGex-2T-Basigin ecto |
This paper |
N/A |
BL21Tuner-pGex-2T-W1Embigin |
This paper |
N/A |
BL21Tuner-pGex-2T-W2Embigin |
This paper |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
Fibronectin N-terminal heparin binding fragment |
Sigma-Aldrich |
F9911 |
Fibronectin 45kDa gelatin binding fragment |
Sigma-Aldrich |
F0162 |
Recombinant Human Fibronectin Fragment 2 (Ser607-Pro1265), |
R&D Systems |
#3225-FN |
Recombinant Human Fibronectin Fragment 3 (Glu1266-Pro1908) |
R&D Systems |
#3938-FN |
Recombinant Human Fibronectin Fragment 4 (Val1913-Glu2477) |
R&D Systems |
#3624-FN |
Corning™ Fibronectin, Human |
Thermo Fisher Scientific |
11533610 |
Recombinant Human Integrin alpha5beta1 |
R&D Systems |
#3230-A5-050 |
ProLong Gold Antifade Mountant |
ThermoFisher, Canoga Park, California |
ref: P36930
|
5-Ethynyl-2′-deoxyuridine |
Sigma |
900584 |
|
Critical commercial assays |
|
Protino Glutathione Agarose 4B |
Macherey-Nagel Germany |
REF 745500.100 |
RNAscope Multiplex Fluorescent Detection Kit v2 |
ACDBio, Newark, California |
ref: 323100 |
RNAscope Slc16a1 (mouse) |
ACDBio, Newark, California |
ref: 423661-C2 |
RNAscope Bsg (mouse) |
ACDBio, Newark, California |
ref: 491721) |
Opal 570 Reagent Pack dye |
Akoya Biosciences, Marlborough, Massachusetts |
ref: FP1488001KT |
L-lactate assay kit |
Abcam |
ab65330 |
Duolink In Situ Wash Buffers, Fluorescence |
Sigma |
DUO82049 |
Duolink In Situ Mounting Medium with DAPI |
Sigma |
DUO82040
|
Duolink In Situ Probemaker PLUS
|
Sigma |
DUO92009-1KT
|
Duolink In Situ Probemaker MINUS
|
Sigma |
DUO92010-1KT
|
Duolink In Situ Detection Reagents Red
|
Sigma |
DUO92008-30RXN
|
Silica gel on TLC plates, L × W 20 cm × 20 cm, fluorescent indicator: no,
|
Merck |
99570-25EA
|
Methyl cis-15-tetracosenoate
|
Merck |
17265
|
Click-iT™ EdU Imaging Kit with Alexa Fluor™ 488 |
Invitrogen |
C10337 |
|
Deposited data |
|
Analysis of published mouse skin scRNA-seq data |
Joost et al., 2016 |
GEO: GSE67602
|
Analysis of published human skin scRNA-seq data |
Cheng et al., 2018 |
EGA: EGAS00001002927 |
Basigin crystal structure |
Wright et al., 2014 |
PDB: 4U0Q
|
Basigin crystal structure |
Yu et al., 2008 |
PDB: 3BH5
|
Neuroplastin crystal structure |
Owczarek et al., 2010 |
PDB: 2WV3
|
Neuroplastin crystal structure |
Gong et al., 2018 |
PDB: 6A69
|
|
Experimental models: cell lines |
|
Mouse skin keratinocytes |
In-house, Ghahramani et al. 2018
|
N/A |
|
Experimental models: organisms/strains |
|
Mouse: K14ΔNLef1 |
In-house, Nieman et al., 2002
|
N/A |
Mouse: K14ΔNβ-CateninER (D2 line) |
In-house, Lo Celso et al., 2004
|
N/A |
Mouse: TopH2BeGFP |
Ferrer-Vaquer et al., 2010 |
N/A |
Mouse: TUKO53 Emb-/- |
In-house, Silberstein et al., 2016
|
N/A |
Mouse: K14Cre |
Dassule et al., 2000 |
N/A |
Mouse Emb flox/flox
|
Talvi et al., 2021 |
N/A |
|
Oligonucleotides |
|
Mm_Emb_1 Flexitube siRNA |
QIAGEN |
Cat#SI00993307 |
Mm_Emb_4 Flexitube siRNA |
QIAGEN |
Cat#SI00993328 |
AllStars Negative Control siRNA |
QIAGEN |
Cat#1027280 |
RNAscope mouse Bsg |
ACDBio |
ref: 491721 |
RNAscope mouse Slc16a1 |
ACDBio |
ref: 423661-C2 |
|
Recombinant DNA |
|
CCSB-Broad LentiORF - EMB Clone Accession: BC059398 Clone ID: ccsbBroad304_04883 glycerol stock |
Horizon Discovery Ltd (Dharmacon) |
OHS6085-213577454 |
PLX304 |
Adgene |
#25890 |
pcDNA3.1+-EMB |
This paper |
N/A |
pGex-2T-Embigin ecto |
This paper |
N/A |
pGex-2T-Neuroplastin ecto |
This paper |
N/A |
pGex-2T-Basigin ecto |
This paper |
N/A |
pGex-2T-W1Embigin |
This paper |
N/A |
pGex-2T-W2Embigin |
This paper |
N/A |
|
Software and algorithms |
|
Origin 2016 |
OriginLab Corporation |
N/A |
GraphPad Prism 6 |
GraphPad Software |
RRID:SCR_00279 |
Harmony 4.8 High-Content Imaging and Analysis Software |
PerkinElmer |
HH17000001 |
Phasefocus Analyse V3.0.1 + Random Motility Dashboard |
Phase Focus Limited |
N/A |
NDP.view2 (U12388-01) |
Hamahatsu |
N/A |
Fiji – ImageJ |
Schindelin et al., 2012 |
N/A |