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. 2022 Oct 17;12:1010244. doi: 10.3389/fcimb.2022.1010244

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Copyright © 2022 Seabolt, Roellig and Konstantinidis

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Comparison of genomic relatedness using ANI and multilocus coalescent estimations. Left side: ANI tree constructed from pairwise comparisons of draft genomes. Right side: Coalescent tree estimated by ASTRAL-III using gene trees from all pangenome loci. Filled circles indicate nodes with greater than 95% bootstrap support. Open circles indicate nodes with greater than 95% support in the set of trees estimated by STACEY. Grey dashed lines indicate concordant placement of a genome on opposing trees. Colored dashed lines indicate specific genomes which had differing placement.