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. 2022 Oct 21;76(5):850–860. doi: 10.1093/cid/ciac830

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© The Author(s) 2022. Published by Oxford University Press on behalf of Infectious Diseases Society of America.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 3. — Comprehensive assessment of 8 subjects with genomically supported persistent RNA detection in the context of MA COVID-19 cases. A, Global phylogeny annotated with persistent RNA detection. B, Individual timelines of subjects with genomically supported persistent RNA detection annotated with nucleic acid amplification test results, Ct values (when available), COVID-19 symptomatology, and SARS-CoV-2 PANGO lineages (when available). Abbreviations: ALL, acute lymphoblastic leukemia; ALS, amyotrophic lateral sclerosis; BMT, bone marrow transplant; CAD, coronary artery disease; CHF, congestive heart failure; COVID, coronavirus disease; COVID-19, coronavirus disease 2019; Ct, cycle threshold; DDKT, deceased donor kidney transplant; DLBCL, diffuse large B-cell lymphoma; ESRD, end-stage renal disease; F, female; GVHD, graft versus host disease; IS, immunosuppressed; M, male; MA, Massachusetts; NAAT, nucleic acid amplification test; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.