| ABM | Agent based model |
| AUC | Area under the curve |
| CUDA | Compute unified device architecture |
| MOI | Multiplicity of infection |
| ODE | Ordinary differential equation |
| PDM | Partial differential equation model |
| SARS-CoV-2 | Severe acute respiratory syndrome coronavirus 2 |
| SHIV | Simian-human immunodeficiency virus |