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Enrichment for gene regions in trans CpG–transcript relationships. Gene regions were annotated based on the UCSC hg19 knownGene track. GE-associated CpG sites were depleted in 3’ untranslated regions (PREG), 5’ untranslated regions (AYATS), and in promoters (AYATS and PREG). Exons and introns were enriched in PREG and AYATS, respectively (***P < 0.0005; **P < 0.005; *P < 0.05).
