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. 2022 Aug 31;13(10):e00527. doi: 10.14309/ctg.0000000000000527

Table 1.

Demographic, clinical phenotype, and genetic findings

Patient no. (sex) Origin Age of onset (yr) Clinical phenotype Extraintestinal involvement Surgical treatment Genetic findings Family history of colorectal cancer and colorectal polyposis Familial cosegregation Classification
Verdict by: Franklina; VarSomeb
Commercial laboratory
1 (female) Ashkenazi Jewish 40–50 10 adenomas (right colon) + small gastric hyperplastic polyps Pancreas SB-IPMN None SMAD4 (NM_005359.6):c.403C>T p.R135* No De novo Pathogenic; PathogenicPathogenic
2 (female) Sephardic Jewish 40–50 Left-sided CRC + <10 adenomas None Left hemicolectomy BMPR1A (NM_004329.3):c.675G>A p.L225= First degree: CRC, polyposis
Second degree: CRC
Yes Likely pathogenic;
Pathogenic
Likely pathogenic
3 (male) Sephardic Jewish 20–30 ∼40 adenomas (whole colon, advanced) None None BMPR1A (NM_004329.3): del ex1-13
Chr10: 86875867–89041308[hg19]
First degree: CRC, polyposis
Second degree: N/A
Yes Pathogenic; Pathogenic Pathogenic
4 (female) Sephardic Jewish 20–30 ∼20 adenomas (right colon) None None BMPR1A (NM_004329.3):del ex3-13
chr10:88611882-89041308[hg19]
First degree: CRC, polyposis
Second degree: CRC, polyposis
Unknown Pathogenic;
Likely pathogenic
Pathogenic
5 (male) Ashkenazi Jewish 30–40 Left-sided CRC + ∼20 adenomas (whole colon, advanced) None Total proctocolectomy with IPAA SMAD4 (NM_005359.6):c.746A>C p.Q249P Second degree: CRC, gastric carcinoma Yes VUS;
Benign
VUS
6 (female) Ashkenazi Jewish 10–20 ∼20 adenomas (whole colon, advanced) None Total proctocolectomy with IPAA BMPR1A (NM_004329.3):c.388T>C p.C130R First degree: CRC
Second degree: CRC
Yes Likely pathogenic;
VUS
VUS
7 (male) Ashkenazi Jewish 40–50 Right-sided CRC + 10 adenomas (ascending and transverse colon, advanced) None Subtotal colectomy BMPR1A (NM_004329.3):c.760C>T p.R254C First degree: CRC
Second degree: CRC
Yes
No
VUS;
VUS
VUS
FANCI (MN_001376911.1):c.1856T>A
p.L619Q
VUS;
VUS
VUS
8 (female) Ashkenazi Jewish 50–60 ∼20 adenomas (whole colon, advanced) Papilla of Vater carcinoma Whipple procedure BMPR1A (NM_004329.3):c.676G>T p.V226F First degree: CRC
Second degree: CRC
Unknown VUS;
VUS
VUS

CRC, colorectal cancer; IPAA, ileal pouch anal anastomosis; SB-IPMN, side branch intraductal papillary mucinous neoplasm; VUS, variant of unknown significance.

a

Franklin: gene-specific artificial intelligence-based variant search engine, by Genoox.

b

VarSome: the human genomic variant search engine.