Table 3.
Significant SNPs associated with the phenotypes.
| Traits | SNP name | Chr | Position (bp) | p-value | Vg (%) | MAF | Other associated phenotypes | Associated genes | |
|---|---|---|---|---|---|---|---|---|---|
| Name | Distance (bp) | ||||||||
| RBC | rs418188401 | 2 | 142,026,337 | 4.08 × 10–06 | 0.42 | 0.467 | RDW_CV | SCN7A | Within |
| RBC | rs415321135 | 2 | 142,135,301 | 1.30 × 10–05 | 0.48 | 0.351 | – | SCN9A | Within |
| HCT | rs402657016 | 18 | 19,382,508 | 9.59 × 10–08 | 1.12 | 0.166 | MCH, MCHC | – | – |
| HCT | rs424122039 | 18 | 19,330,647 | 1.61 × 10–07 | 1.06 | 0.170 | MCH, MCHC | MYADM-like | Within |
| MCH | rs424122039 | 18 | 19,330,647 | 3.00 × 10–08 | 2.96 | 0.170 | HCT, MCHC | MYADM-like | Within |
| MCH | rs402657016 | 18 | 19,382,508 | 5.84 × 10–07 | 2.20 | 0.166 | HCT, MCHC | – | – |
| MCHC | rs424122039 | 18 | 19,330,647 | 4.83 × 10–11 | 2.15 | 0.170 | HCT, MCH | MYADM-like | Within |
| MCHC | rs402657016 | 18 | 19,382,508 | 2.07 × 10–09 | 1.82 | 0.166 | HCT, MCH | – | – |
| MCV | rs427024436 | 5 | 17,364,739 | 3.03 × 10–06 | 0.57 | 0.265 | – | SIRT6, CREB3L3 | Near |
| RDW_CV | rs415321135 | 2 | 142,135,301 | 3.66 × 10–06 | 0.67 | 0.398 | SCN9A | Within | |
| RDW_CV | rs424460878 | 21 | 10,141,822 | 1.36 × 10–05 | 0.67 | 0.366 | – | CCDC67 | Within |
| RDW_CV | rs409151807 | 2 | 142,204,729 | 1.48 × 10–05 | 0.68 | 0.349 | – | SCN9A | Within |
| RDW_CV | rs418188401 | 2 | 142,026,337 | 2.20 × 10–05 | 0.40 | 0.467 | RBC, HCT | SCN7A | Within |
| WBC | rs423900300 | 19 | 11,192,604 | 1.19 × 10–06 | 0.74 | 0.302 | – | ITGA9 | Within |
| NEU | rs419009933 | 20 | 45,260,345 | 8.94 × 10–07 | 4.35 | 0.097 | LYM | LOC101117887 | Within |
| NEU | rs422235744 | 13 | 43,611,954 | 1.75 × 10–05 | 1.57 | 0.275 | – | LOC106991526 | Within |
| LYM | rs419009933 | 20 | 45,260,345 | 3.19 × 10–06 | 3.07 | 0.097 | NEU | LOC101117887 | Within |
| NEU/LYM | rs416257223 | 2 | 175,533,494 | 1.81 × 10–05 | 1.51 | 0.091 | MGAT5 | Within | |
| EOS | rs429955018 | 1 | 263,341,417 | 3.05 × 10–07 | 18.32 | 0.056 | – | SLC19A1 | Within |
| EOS | rs424356478 | 3 | 112,927,310 | 3.32 × 10–05 | 1.98 | 0.466 | – | NAV3 | Near |
| BAS | rs417370910 | 4 | 82,433,190 | 6.26 × 10–06 | 1.00 | 0.341 | – | AMPH | Within |
| PLT | rs419857573 | 2 | 99,213,936 | 1.76 × 10–07 | 2.73 | 0.296 | PCT | LOC105608461 | Within |
| PLT | rs410481204 | 2 | 34,556,977 | 1.20 × 10–05 | 1.83 | 0.370 | – | NTRK2 | Within |
| MPV | rs424459233 | 2 | 102,985,180 | 1.51 × 10–06 | 5.24 | 0.199 | – | MSRA | Within |
| PCT | rs419857573 | 2 | 99,213,936 | 8.10 × 10–07 | 7.58 | 0.296 | PLT | LOC105608461 | Within |
| PCT | rs426696259 | 25 | 6,748,890 | 8.73 × 10–06 | 4.40 | 0.407 | – | SLC35F3 | Within |
SNP position based on OAR_v4.0 assembly; Vg (%) is additive genetic variance explained by each SNP; MAF is minor allele frequency.