Signaling puncta |
EML4‐ALK fusion |
RAS signaling overactivation |
Non‐small‐cell lung cancer, ovarian cancer |
[188, 189] |
|
CCDC6‐RET fusion |
RAS signaling overactivation |
Non‐small‐cell lung cancer, papillary thyroid cancer |
[188, 189] |
|
SHP2 mutants |
RAS signaling hyperactivation |
Esophagus cancer |
[190] |
|
DnaJB1‐PKAcat fusion |
Tumorigenic cAMP signaling |
Atypical liver cancer fibrolamellar carcinoma |
[191] |
|
DACT1 |
WNT signaling inhibition |
Breast and prostate cancer |
[195] |
Glycogen compartments |
G6PC |
YAP signaling activation |
Liver cancer |
[194] |
Stress granules |
YB1 |
Cell proliferation |
Sarcoma |
[196] |
|
KRAS mutants |
Chemoresistance |
Pancreatic cancer |
[198] |
|
DDX3X |
Tumorigenesis |
Medulloblastoma |
[276] |
|
mTORC1 |
Cancer cell survival |
Multiple cancer types |
[135, 200] |
|
Astrin |
Protect cancer cells from apoptosis |
Breast and lung cancer |
[199] |
Amyloid bodies |
rIGSRNA |
Tumor growth repression |
Breast, lung, and prostate cancer |
[202] |
Perinucleolar compartments |
PNCTR |
Malignant transformation of cancer cells |
Multiple cancer types |
[204] |
Nuclear speckles |
SPOP mutants |
Defect in oncoproteins degradation |
Prostate cancer |
[206] |
Nuclear paraspeckles |
NEAT1 |
Chemoresistance |
Multiple cancer types |
[207] |
Amyloid fibrils |
p53 mutants |
Oncogenicity transformation of p53 |
Multiple cancer types |
[208, 209, 210] |
Heterochromatin |
HP1α
|
Telomere elongation |
Breast cancer |
[9, 213] |
Cajal bodies |
Telomeric RNA |
Telomere elongation |
Multiple cancer types |
[214, 215, 216, 217, 218] |
PML bodies |
TRF2, RAD52 |
Telomere elongation |
Sarcoma |
[219, 220, 221] |
DNA repair foci |
PARP1, FUS, TAF15, EWS |
DNA damage repair |
Multiple cancer types |
[28, 223] |
|
MRN complex, γH2AX |
DNA damage repair |
Multiple cancer types |
[225, 226] |
|
MRN complex, DilncRNAs |
DNA damage repair |
Multiple cancer types |
[226] |
|
53BP1 |
DNA damage repair |
Multiple cancer types |
[227] |
NP bodies |
NORAD, PUM1/2 |
DNA damage repair |
Colon cancer |
[230] |
Transcription condensates |
CDK7, CDK12, CDK13 |
Oncogenic transcription |
Multiple cancer types |
[17, 274, 275] |
|
YAP, TAZ |
Oncogenic transcription |
Breast cancer |
[236, 237] |
|
ENL mutants |
Oncogenic transcription |
Wilms tumor |
[238] |
|
EWS‐FLI1 fusion |
Oncogenic transcription |
Ewing sarcoma |
[245] |
|
AKAP95 |
Oncogenic transcription and splicing |
Multiple cancer types |
[239] |
Super‐enhancers |
TAL1 |
Leukemogenic genes transcription |
T cell leukemia |
[240] |
|
BRD4, MED1 |
Oncogenic transcription |
Multiple myeloma, liposarcoma |
[241, 248] |
|
HOXB8 |
Oncogenic transcription |
Osteosarcoma |
[242] |
|
YTHDC1, m6A‐mRNAs |
Gene transcription and mRNA processing |
Acute myeloid leukemia |
[243] |
|
NUP98‐HOXA9 fusion |
Leukemogenic genes transcription |
Leukemia |
[246] |
|
FUS‐CHOP |
Oncogenic transcription |
Myxoid liposarcoma |
[248] |