Table 1.
A comprehensive collection of eBP and cBP, including the additional BP data generated in this study (eBP_BPHunter and cBP_BPHunter), followed by consensus-guided positional adjustment
BP dataset | No. of raw BP | A, % | C, % | G, % | T, % | No. of adj. BP | A, % | C, % | G, % | T, % | Δ no. of BP |
---|---|---|---|---|---|---|---|---|---|---|---|
eBP_Mercer | 59,359 | 78.5 | 8.5 | 4.7 | 8.4 | 54,531 | 84.9 | 8.0 | 3.5 | 3.6 | −4,828 |
eBP_Taggart | 27,795 | 67.8 | 15.3 | 5.5 | 11.4 | 27,635 | 73.7 | 13.1 | 4.1 | 9.1 | −160 |
eBP_Pineda | 138,313 | 75.0 | 7.6 | 9.5 | 7.9 | 133,652 | 77.0 | 7.3 | 8.9 | 6.9 | −4,661 |
eBP_Talhouarne | 240 | 4.6 | 84.2 | 4.6 | 6.7 | 240 | 8.3 | 81.7 | 3.3 | 6.7 | 0 |
eBP_Briese | 43,630 | 100.0 | 0.0 | 0.0 | 0.0 | 43,630 | 100.0 | 0.0 | 0.0 | 0.0 | 0 |
eBP_BPHunter | 8,682 | 45.9 | 22.4 | 18.2 | 13.5 | 7,990 | 56.6 | 21.8 | 15.7 | 5.8 | −692 |
eBP | 210,986 | 73.4 | 9.1 | 8.5 | 9.1 | 198,256 | 76.9 | 8.6 | 7.7 | 6.9 | −12,730 |
cBP_BPP | 232,828 | 98.8 | 1.1 | 0.0 | 0.2 | 232,820 | 98.8 | 1.1 | 0.0 | 0.2 | −8 |
cBP_Branchpointer | 352,322 | 98.8 | 0.5 | 0.0 | 0.7 | 325,304 | 99.5 | 0.6 | 0.0 | 0.0 | −27,018 |
cBP_LaBranchoR | 203,914 | 98.3 | 1.6 | 0.0 | 0.0 | 203,907 | 98.3 | 1.6 | 0.0 | 0.0 | −7 |
cBP_BPHunter | 20,718 | 100.0 | 0.0 | 0.0 | 0.0 | 20,718 | 100.0 | 0.0 | 0.0 | 0.0 | 0 |
cBP | 479,366 | 97.9 | 1.5 | 0.0 | 0.6 | 451,215 | 98.3 | 1.6 | 0.0 | 0.1 | −28,151 |
Total BP | 546,559 | 90.40 | 4.25 | 2.78 | 2.57 | ||||||
mBP | 102,912 | 99.15 | 0.83 | 0.01 | 0.01 |