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. 2022 Jul 5;40(1):111037. doi: 10.1016/j.celrep.2022.111037
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit anti-calretinin (diluted 1:1000) Swant Cat: CR7699/3H; RRID: AB 10000321
Chicken anti-GFP (diluted 1:3000) Aves Labs Cat: GFP-1020; RRID: AB_10000240
Goat anti-Prox1 (diluted 1:300) R&D systems Cat: AF2727; RRID: AB_2170716
Mouse anti-Reelin (CR-50, diluted 1:300) MBL International Cat: D223-3; RRID: AB_843523
Goat anti mCherry (diluted in 1:125) Antibodies-online Cat: ABIN1440057; RRID: AB_2333093
Rat anti-RFP (diluted 1:500) ChromoTek Cat: 5f8-100; RRID: AB_2336064
Alexa Fluor 647 Streptavidin (diluted 1:500) Jackson ImmunoResearch Labs Cat: 016-600-084; RRID: AB_2341101
Donkey anti-goat IgG (HL) Alexa Fluor 488 (diluted 1:500) Molecular Probes Cat: A-11055; RRID: AB_2534102
Anti-chicken IgG (H + L) Alexa Fluor 488 (diluted 1:500) Jackson ImmunoResearch Labs Cat: 703-545-155; RRID: AB_2340375
Donkey anti-rat IgG (H + L) Cy3 (diluted 1:500) Jackson ImmunoResearch Labs Cat: 712-165-150; RRID: AB_2340666
Donkey anti-mouse IgG (H + L) Alexa Fluor 647 (diluted 1:500) Molecular Probes Cat: A-31571; RRID: AB_162542
Donkey anti-rabbit IgG (H + L) AlexaFluor 647 (diluted 1:500) Molecular Probes Cat: A-31573; RRID: AB_2536183
Rabbit anti-calretinin (diluted 1:1000) Swant Cat: CR7699/3H; RRID: AB_10000321
Chicken anti-GFP (diluted 1:3000) Aves Labs Cat: GFP-1020; RRID: AB_10000240
Goat anti-Prox1 (diluted 1:300) R&D systems Cat: AF2727; RRID: AB_2170716

Bacterial and virus strains

AAV-hSyn-DIO-hM3Dq-mCherry (AAV8) Krashes et al., (2011), Addgene Cat: 44361
AAV-hSyn-DIO-hM4Di-mCherry (AAV8) Krashes et al., (2011), Addgene Cat: 44362
AAV-hSyn-GFP-Cre (AAV8) UNC Vector Core N/A
AAV-EF1a-DIO-shSlc18A2-mCerulean (AAV8) This paper N/A
AAV-EF1a-DIO-shLacZ-mCerulean (AAV8) This paper N/A
pCAG-DiO-mCerulean-WPRE This paper N/A
pAAV-EF1a-DiO-mCherry A gift from Karl Deisseroth, Addgene Cat: 20299

Chemicals, peptides, and recombinant proteins

Clozapine-N-Oxide Tocris Cat:4936-10MG
Fluoxetine hydrochloride Sigma-Aldrich Cat: F132-10MG
Serotonin hydrochloride Sigma-Aldrich Cat: H9523-25MG
CNQX Tocris Cat: 0190
DL-2-Amino-5-Phosphonovaleric acid (AP-V) Sigma-Aldrich Cat: A5282-50MG
Picrotoxin (PTX) Tocris Cat: 1128
Bovine serum albumin (BSA) Sigma-Aldrich Cat: A8806
Normal donkey serum Sigma-Aldrich Cat: S30-100ML
4',6-Diamidine-2’-phenylindole dihydrochloride (DAPI) Sigma-Aldrich Cat: D9542
Fast Green Roche Cat: 06402712001
Isoflurane 100% inhalation vapor liquid Piramal Critical Care Limited N/A
Paraformaldehyde Sigma-Aldrich Cat: 441244
Pentobarbital sodium (Euthatal) Merial Animal Health Ltd N/A
Triton X-100 Sigma-Aldrich Cat: T8787-100ML
0.9% NaCl Sigma-Aldrich Cat: S76530
Dulbecco's Modified Eagle Medium Gibco Cat: 21969-035
Penicillin/Streptomycin Gibco Cat: 15140-122

Critical commercial assays

ACDBio Multiplex Fluorescent Kit v2 ACDBio Cat: 323110

Experimental Models: Cell lines

HEK293FT ThermoScientific Cat: R70007

Experimental Models: Organisms/strains

Mice: NexCre/+ Gift from K.A. Nave MGI: 2668659
Mice: Bak−/−;Baxfl/fl The Jackson Laboratory JAX: 006329; RRID: IMSR_JAX:006329
Mice: Htr3a-Cre Gensat Cat: 037089-UCD
RRID: MMRRC 037089-UCD
Mice: VipCre/+ The Jackson Laboratory Cat: 010908; RRID: IMSR JAX:010908
Mice: RCLtdT/+ The Jackson Laboratory JAX: 007909; RRID: IMSR_JAX:007909
Mice: CD1 Charles River Crl: CD1(ICR)
Mice: Slc17a7-/- (Vglut1-/-) Fremeau et al., 2004 MGI: 3617803
Mice: Slc17a6fl/fl (Vglut2fl/fl) Hnasko et al. (2010) MGI: 4879093
Mice: Fucci2fl/fl Mort et al. (2014) MGI: 5645798

Oligonucleotides

FW primer for shSlc18a2 CTAGGCAAGCTGATCCTGTTCAT
CGCCTGACCCACGATGAACAGG
ATCAGCTTGCTTTTTG
RV primer for shSlc18a2 AATTCAAAAAGCAAGCTGATCCT
GTTCATCGTGGGTCAGGCGATG
AACAGGATCAGCTTGC
RNAScope® Probe-Mm-Slc18a2 ACDBio Cat: 425331
RNAScope® Probe-MmSlc6A4 ACDBio Cat: 315851

Software and algorithms

FIJI (ImageJ) National Institute of Health https://fiji.sc/; https://imagej.nih.gov/ij/index.html; RRID: SCR_003070
MATLAB MathWorks https://www.mathworks.com/products/matlab.html; RRID: SCR_001622
LAS AF Leica Microsystems https://www.leica-microsystems.com/; RRID: SCR_013673
Stereo Investigator MBF Biosciences https://www.mbfbioscience.com/stereo-investigator; RRID: SCR_018948

Other

P-2000 micropipette puller Sutter Instrument https://www.leicabiosystems.com/histology-equipment/microtomes/
ZEISS Apotome 2 ZEISS https://www.zeiss.com/microscopy
Leica TCS-SP8 confocal Leica https://www.leica-microsystems.com/
LightCycler® 96 Roche Life Science N/A
Optima-L100 XP Beckman-Coulter N/A